RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 KCNN2Q9H2S1 579 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 TMPRSS4Q9NRS4 437 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 ARL15Q9NXU5 204 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 GMIPQ9P107 970 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 PPIEQ9UNP9 301 aaKnown RBP8.07□□□□□ -1.12
USP47-203ENST00000399455 ROBO3Q96MS0 1386 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 TNFP01375 233 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 PYGMP11217 842 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 AGXTP21549 392 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 FMO4P31512 558 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 RPS7P62081 194 aaKnown RBP8.07□□□□□ -1.12
USP47-203ENST00000399455 UBE3AQ05086 875 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 MGAT5Q09328 741 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 VITQ6UXI7 678 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 FBXO39Q8N4B4 442 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 ANKLE1Q8NAG6 615 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 HIPK4Q8NE63 616 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 ANKRD49Q8WVL7 239 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 IRF7Q92985 503 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 FAM118BQ9BPY3 351 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 OPTCQ9UBM4 332 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 KLF15Q9UIH9 416 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 C1orf232A0A0U1RR37 186 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 MYO1CO00159 1063 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 TSPAN1O60635 241 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 ARF4P18085 180 aaPredicted RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 AMPD1P23109 780 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 BNC1Q01954 994 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 ALFQ53S48 1182 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 RASGRP2Q7LDG7 609 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 RAVER1Q8IY67 606 aaKnown RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 ZCWPW1Q9H0M4 648 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 SEMA6BQ9H3T3 888 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 UBP1Q9NZI7 540 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 HCN3Q9P1Z3 774 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 GTF2A1LQ9UNN4 478 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 PCDHA3Q9Y5H8 950 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 AKAP3O75969 853 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 SLC25A14O95258 325 aaPredicted RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 CYP1A1P04798 512 aaPredicted RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 ADH5P11766 374 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 AVPR1BP47901 424 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 TAF10Q12962 218 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 ZNF618Q5T7W0 954 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 EBNA1BP2Q99848 306 aaKnown RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 NUSAP1Q9BXS6 441 aaKnown RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 CARD9Q9H257 536 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 SNX6Q9UNH7 406 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 ACOT9Q9Y305 439 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 KCPQ6ZWJ8 1503 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 C9J4A7 227 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 H3BNH8 94 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 RNF103O00237 685 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 VARSP26640 1264 aaKnown RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 CDH4P55283 916 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 DNAL1Q4LDG9 190 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 PACS1Q6VY07 963 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 SLC44A2Q8IWA5 706 aaPredicted RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 HMGB4Q8WW32 186 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 SGSM3Q96HU1 749 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 ZNF232Q9UNY5 417 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 MTO1Q9Y2Z2 717 aaKnown RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 SYPP08247 313 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 CCR4P51679 360 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 NUP107P57740 925 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 MMRN1Q13201 1228 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 PARP6Q2NL67 630 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 VARS2Q5ST30 1063 aaKnown RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 SDHAF4Q5VUM1 108 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 GKN2Q86XP6 184 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 ECHDC2Q86YB7 292 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 CCDC33Q8N5R6 958 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 KIAA1143Q96AT1 154 aaPredicted RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 MYOCQ99972 504 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 TRIM51Q9BSJ1 452 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 THUMPD3Q9BV44 507 aaKnown RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 ATAD3AQ9NVI7 634 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 NUDT5Q9UKK9 219 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 OR10H1Q9Y4A9 318 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 CHURC1-FNTBB4DL54 471 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 LYPLA2O95372 231 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 TAS2R50P59544 299 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 CCDC153Q494R4 210 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 FAM45BPQ6NSW5 357 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 MILR1Q7Z6M3 343 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 GPSM1Q86YR5 675 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 CLEC4FQ8N1N0 589 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 FAM45AQ8TCE6 357 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 GPR152Q8TDT2 470 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 THOC1Q96FV9 657 aaKnown RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 INPP4AQ96PE3 977 aaPredicted RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 CCT7Q99832 543 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 LHX5Q9H2C1 402 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 PARVBQ9HBI1 364 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 ARHGEF4Q9NR80 690 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 ZNF780BQ9Y6R6 833 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 NEMP2A6NFY4 417 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 SEC31AO94979 1220 aaKnown RBP8.06□□□□□ -1.12
USP47-203ENST00000399455 OCA2Q04671 838 aa8.06□□□□□ -1.12
USP47-203ENST00000399455 SLC9A5Q14940 896 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms