RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 CRHR1P34998 444 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 GCKP35557 465 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 CPOXP36551 454 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 CDH13P55290 713 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 SEMG2Q02383 582 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 DCAF4L1Q3SXM0 396 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 TMPRSS6Q8IU80 811 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 UPF1Q92900 1129 aaKnown RBP eCLIP11.95□□□□□ -0.5
ITSN1-211ENST00000399355 MTBPQ96DY7 904 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 HBEGFQ99075 208 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 NPAS2Q99743 824 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 EBF3Q9H4W6 596 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 FBRSL1Q9HCM7 1045 aaKnown RBP11.95□□□□□ -0.5
ITSN1-211ENST00000399355 GON4LQ3T8J9 2241 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 PDCD11Q14690 1871 aaKnown RBP11.95□□□□□ -0.5
ITSN1-211ENST00000399355 PEX1O43933 1283 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 HSPA4LO95757 839 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 NOS2P35228 1153 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 DPP6P42658 865 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 ADAM17P78536 824 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 ACAP1Q15027 740 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 ARL13AQ5H913 290 aaPredicted RBP11.95□□□□□ -0.5
ITSN1-211ENST00000399355 SPRYD7Q5W111 196 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 CLEC6AQ6EIG7 209 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 LRRC52Q8N7C0 313 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 DQX1Q8TE96 717 aaKnown RBP11.95□□□□□ -0.5
ITSN1-211ENST00000399355 C17orf102A2RUQ5 167 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 G3V2L1 256 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 ZNF157P51786 506 aaPredicted RBP11.95□□□□□ -0.5
ITSN1-211ENST00000399355 PURAQ00577 322 aaKnown RBP11.95□□□□□ -0.5
ITSN1-211ENST00000399355 USP10Q14694 798 aaKnown RBP11.95□□□□□ -0.5
ITSN1-211ENST00000399355 PARP6Q2NL67 630 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 PDPK2PQ6A1A2 396 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 ZNF410Q86VK4 478 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 INPP5DQ92835 1189 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 KCNN1Q92952 543 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 SLC39A8Q9C0K1 460 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 IL1RL2Q9HB29 575 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 A0A1B0GTL3 188 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 ZNF195O14628 629 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 DNAJA2O60884 412 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 POLBP06746 335 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 THP07101 528 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 ARNTP27540 789 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 SERPINB6P35237 376 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 KCNC1P48547 511 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 ALFQ53S48 1182 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 PCDH20Q8N6Y1 951 aaKnown RBP11.95□□□□□ -0.5
ITSN1-211ENST00000399355 MCUQ8NE86 351 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 URGCPQ8TCY9 931 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 ZNF333Q96JL9 665 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 ADAM2Q99965 735 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 XPR1Q9UBH6 696 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 PADI3Q9ULW8 664 aa11.95□□□□□ -0.5
ITSN1-211ENST00000399355 CROCCQ5TZA2 2017 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.94□□□□□ -0.5
ITSN1-211ENST00000399355 GLTPD2A6NH11 291 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 ENO3P13929 434 aaPredicted RBP11.94□□□□□ -0.5
ITSN1-211ENST00000399355 GRIK1P39086 918 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 NUDT2P50583 147 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 SLC8A3P57103 927 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 SFT2D3Q587I9 215 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 ZNF470Q6ECI4 717 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 LRRC8BQ6P9F7 803 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 ALKBH8Q96BT7 664 aaKnown RBP11.94□□□□□ -0.5
ITSN1-211ENST00000399355 TNIP3Q96KP6 325 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 HNRNPABQ99729 332 aaKnown RBP11.94□□□□□ -0.5
ITSN1-211ENST00000399355 RUVBL2Q9Y230 463 aaKnown RBP11.94□□□□□ -0.5
ITSN1-211ENST00000399355 MBLAC1A4D2B0 266 aaPredicted RBP11.94□□□□□ -0.5
ITSN1-211ENST00000399355 HHLA1C9JL84 531 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 PAGE1O75459 146 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 SMNDC1O75940 238 aaKnown RBP eCLIP11.94□□□□□ -0.5
ITSN1-211ENST00000399355 PIGNO95427 931 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 HLA-DQB2P05538 268 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 GARSP41250 739 aaKnown RBP11.94□□□□□ -0.5
ITSN1-211ENST00000399355 RALGDSQ12967 914 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 CSHL1Q14406 222 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 EFHC1Q5JVL4 640 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 CAPRIN2Q6IMN6 1127 aaKnown RBP11.94□□□□□ -0.5
ITSN1-211ENST00000399355 ZNF598Q86UK7 904 aaKnown RBP11.94□□□□□ -0.5
ITSN1-211ENST00000399355 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.94□□□□□ -0.5
ITSN1-211ENST00000399355 TMA16Q96EY4 203 aaKnown RBP11.94□□□□□ -0.5
ITSN1-211ENST00000399355 TUBGCP5Q96RT8 1024 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 A0A1B0GVG6 124 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 TNPO2O14787 897 aaKnown RBP11.94□□□□□ -0.5
ITSN1-211ENST00000399355 SKIV2L2P42285 1042 aaKnown RBP11.94□□□□□ -0.5
ITSN1-211ENST00000399355 GRIA4P48058 902 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 AQP4P55087 323 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 MPP3Q13368 585 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 PSMD5Q16401 504 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 SLC39A12Q504Y0 691 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 RABGAP1LQ5R372 815 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 SNX32Q86XE0 403 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 FSTL5Q8N475 847 aaPredicted RBP11.94□□□□□ -0.5
ITSN1-211ENST00000399355 FCRL2Q96LA5 508 aaPredicted RBP11.94□□□□□ -0.5
ITSN1-211ENST00000399355 TRPV6Q9H1D0 765 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 TLR9Q9NR96 1032 aa11.94□□□□□ -0.5
ITSN1-211ENST00000399355 SPECC1L-ADORA2AF8WAN1 911 aa11.93□□□□□ -0.5
ITSN1-211ENST00000399355 RNASEH1O60930 286 aaKnown RBP11.93□□□□□ -0.5
ITSN1-211ENST00000399355 PGAM1P18669 254 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms