RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 KCTD11Q693B1 232 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 DNAJB7Q7Z6W7 309 aaPredicted RBP15.43■□□□□ 0.06
COL25A1-201ENST00000399126 PPM1NQ8N819 430 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 BCAS4Q8TDM0 211 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 TSGA13Q96PP4 275 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 CYP2S1Q96SQ9 504 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 ZBP1Q9H171 429 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 CNOT10Q9H9A5 744 aaKnown RBP15.43■□□□□ 0.06
COL25A1-201ENST00000399126 SMPD4Q9NXE4 827 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 IPO11Q9UI26 975 aaKnown RBP15.43■□□□□ 0.06
COL25A1-201ENST00000399126 EBAG9O00559 213 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 NRG2O14511 850 aaPredicted RBP15.43■□□□□ 0.06
COL25A1-201ENST00000399126 AP2A1O95782 977 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 HLA-DQB2P05538 268 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 RHOQP17081 205 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 RING1Q06587 406 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 KLHL38Q2WGJ6 581 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 ADGRD1Q6QNK2 874 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 DENND1CQ8IV53 801 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 CTAGE3PQ8IX95 158 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 RIBC1Q8N443 379 aaPredicted RBP15.43■□□□□ 0.06
COL25A1-201ENST00000399126 FIBCD1Q8N539 461 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 LZTR1Q8N653 840 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 STAMBPL1Q96FJ0 436 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 SPACA7Q96KW9 195 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 MYRFLQ96LU7 910 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 KLHL5Q96PQ7 755 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 TMEM248Q9NWD8 314 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 PCDHB12Q9Y5F1 795 aa15.43■□□□□ 0.06
COL25A1-201ENST00000399126 hCG_2014768A0A024R1R8 64 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 WASH4PA8MWX3 477 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 MTSS1O43312 755 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 TIMM44O43615 452 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 TACR2P21452 398 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 ATP5DP30049 168 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 MSH2P43246 934 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 HTRA4P83105 476 aaPredicted RBP15.42■□□□□ 0.06
COL25A1-201ENST00000399126 COG7P83436 770 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 CDK16Q00536 496 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 LGI2Q8N0V4 545 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 UMODL1-AS1Q8N2C9 162 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 MZB1Q8WU39 189 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 TRABDQ9H4I3 376 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 ALG13Q9NP73 1137 aaKnown RBP15.42■□□□□ 0.06
COL25A1-201ENST00000399126 INTS9Q9NV88 658 aaKnown RBP15.42■□□□□ 0.06
COL25A1-201ENST00000399126 TRPM5Q9NZQ8 1165 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 PPARGC1AQ9UBK2 798 aaKnown RBP15.42■□□□□ 0.06
COL25A1-201ENST00000399126 TRHDEQ9UKU6 1024 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 UNC80Q8N2C7 3258 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 MYLKQ15746 1914 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 GOLGA8RI6L899 631 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 MATN3O15232 486 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 TGM5O43548 720 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 PEX11BO96011 259 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 TSHRP16473 764 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 TPH1P17752 444 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 ACVRL1P37023 503 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 SGSHP51688 502 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 FPGSQ05932 587 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 TMEM240Q5SV17 173 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 SNX30Q5VWJ9 437 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 PSMG2Q969U7 264 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 LRRC39Q96DD0 335 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 IL12RB2Q99665 862 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 XIRP2A4UGR9 3374 aa15.42■□□□□ 0.06
COL25A1-201ENST00000399126 TTC24A2A3L6 582 aaPredicted RBP15.41■□□□□ 0.06
COL25A1-201ENST00000399126 SDR42E2A6NKP2 422 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 F7P08709 466 aaPredicted RBP15.41■□□□□ 0.06
COL25A1-201ENST00000399126 PPM1AP35813 382 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 RPS24P62847 133 aaKnown RBP15.41■□□□□ 0.06
COL25A1-201ENST00000399126 CERCAMQ5T4B2 595 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 NUGGCQ68CJ6 796 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 ZNF354CQ86Y25 554 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 TCEAL8Q8IYN2 117 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 C7orf61Q8IZ16 206 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 TTC16Q8NEE8 873 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 OR52K2Q8NGK3 314 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 GDAP1Q8TB36 358 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 SLC44A1Q8WWI5 657 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 VAT1Q99536 393 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 EPN3Q9H201 632 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 RBM22Q9NW64 420 aaKnown RBP eCLIP15.41■□□□□ 0.06
COL25A1-201ENST00000399126 HBS1LQ9Y450 684 aaKnown RBP15.41■□□□□ 0.06
COL25A1-201ENST00000399126 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.41■□□□□ 0.06
COL25A1-201ENST00000399126 DRGXA6NNA5 263 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 STC2O76061 302 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 MLNP12872 115 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 STX2P32856 288 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 PEX19P40855 299 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 MAXP61244 160 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 SLC10A7Q0GE19 358 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 ITPRIPL1Q6GPH6 555 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 KDELC2Q7Z4H8 507 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 DNAAF3Q8N9W5 541 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 PDZD8Q8NEN9 1154 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 GSDMBQ8TAX9 411 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 PABPC5Q96DU9 382 aaKnown RBP15.41■□□□□ 0.06
COL25A1-201ENST00000399126 PRICKLE1Q96MT3 831 aaPredicted RBP15.41■□□□□ 0.06
COL25A1-201ENST00000399126 C12orf65Q9H3J6 166 aaKnown RBP15.41■□□□□ 0.06
COL25A1-201ENST00000399126 TRPC7Q9HCX4 862 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms