RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 CDK12Q9NYV4 1490 aaPredicted RBP11.78□□□□□ -0.52
HLCS-202ENST00000399120 IL12AP29459 219 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 PDHA2P29803 388 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 GTF2A2P52657 109 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 SRSF11Q05519 484 aaKnown RBP11.78□□□□□ -0.52
HLCS-202ENST00000399120 TNK2Q07912 1038 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 ITGB3BPQ13352 177 aaPredicted RBP11.78□□□□□ -0.52
HLCS-202ENST00000399120 RGL4Q8IZJ4 473 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 LGI2Q8N0V4 545 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 PCSK9Q8NBP7 692 aaKnown RBP11.78□□□□□ -0.52
HLCS-202ENST00000399120 SYT15Q9BQS2 421 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 CDHR5Q9HBB8 845 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 CATSPERZQ9NTU4 200 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 TMCO1Q9UM00 188 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 TNFSF13BQ9Y275 285 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 CNTNAP5Q8WYK1 1306 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 RIPK2O43353 540 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 CATP04040 527 aaKnown RBP11.78□□□□□ -0.52
HLCS-202ENST00000399120 NTRK1P04629 796 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 RPS6KA3P51812 740 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 PLK1P53350 603 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 HYIQ5T013 277 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 IRGCQ6NXR0 463 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 LZTR1Q8N653 840 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 ZNF540Q8NDQ6 660 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 PSMA8Q8TAA3 256 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 ATXN2LQ8WWM7 1075 aaKnown RBP11.78□□□□□ -0.52
HLCS-202ENST00000399120 DPF3Q92784 378 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 DDX20Q9UHI6 824 aaKnown RBP11.78□□□□□ -0.52
HLCS-202ENST00000399120 STOML2Q9UJZ1 356 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 CTTNBP2Q8WZ74 1663 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 AGRPO00253 132 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 LCA5LO95447 670 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 POLR2EP19388 210 aaKnown RBP11.78□□□□□ -0.52
HLCS-202ENST00000399120 RASA1P20936 1047 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 ALDH3A2P51648 485 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 RAB25P57735 213 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 ARF3P61204 181 aaPredicted RBP11.78□□□□□ -0.52
HLCS-202ENST00000399120 MRPS22P82650 360 aaKnown RBP11.78□□□□□ -0.52
HLCS-202ENST00000399120 ARF1P84077 181 aaKnown RBP11.78□□□□□ -0.52
HLCS-202ENST00000399120 FBXO47Q5MNV8 452 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 OVOS1Q6IE37 1185 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 ACTL9Q8TC94 416 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 MAT2BQ9NZL9 334 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 SSR3Q9UNL2 185 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 FAM50BQ9Y247 325 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 A0A0G2JLW4 131 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 NR2F1P10589 423 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 ATP5F1P24539 256 aaPredicted RBP11.78□□□□□ -0.52
HLCS-202ENST00000399120 PKNOX1P55347 436 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 MYL6P60660 151 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 CYP4F2P78329 520 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 CDK16Q00536 496 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 CYP4F3Q08477 520 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 PERM1Q5SV97 790 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 SAMD3Q8N6K7 520 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 PPP1R16AQ96I34 528 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 TRNT1Q96Q11 434 aaKnown RBP11.78□□□□□ -0.52
HLCS-202ENST00000399120 GSDMCQ9BYG8 508 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 INTS7Q9NVH2 962 aaKnown RBP11.78□□□□□ -0.52
HLCS-202ENST00000399120 PLAGL2Q9UPG8 496 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 MED24O75448 989 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 SERPINA1P01009 418 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 ICAM1P05362 532 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 CCNYL3P0C7X3 344 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 ADIGQ0VDE8 80 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 FBXL19Q6PCT2 694 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 MSANTD1Q6ZTZ1 278 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 PLEKHH3Q7Z736 793 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 CACUL1Q86Y37 369 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 AADATQ8N5Z0 425 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 SERPINB11Q96P15 392 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 UXTQ9UBK9 157 aaPredicted RBP11.78□□□□□ -0.52
HLCS-202ENST00000399120 SNCAIPQ9Y6H5 919 aa11.78□□□□□ -0.52
HLCS-202ENST00000399120 OVOS2A0A0G2JMS6 1433 aa11.77□□□□□ -0.52
HLCS-202ENST00000399120 OVOS2A0A0J9YW53 1432 aa11.77□□□□□ -0.52
HLCS-202ENST00000399120 OVOS2Q6IE36 1432 aa11.77□□□□□ -0.52
HLCS-202ENST00000399120 A8MX80 341 aa11.77□□□□□ -0.52
HLCS-202ENST00000399120 TEX46H3BTG2 121 aa11.77□□□□□ -0.52
HLCS-202ENST00000399120 GRIN3BO60391 1043 aa11.77□□□□□ -0.52
HLCS-202ENST00000399120 SNX4O95219 450 aa11.77□□□□□ -0.52
HLCS-202ENST00000399120 HOXB8P17481 243 aaPredicted RBP11.77□□□□□ -0.52
HLCS-202ENST00000399120 NPTX2P47972 431 aa11.77□□□□□ -0.52
HLCS-202ENST00000399120 ZMYND11Q15326 602 aa11.77□□□□□ -0.52
HLCS-202ENST00000399120 ZNF549Q6P9A3 640 aa11.77□□□□□ -0.52
HLCS-202ENST00000399120 TEX47Q8TBZ9 253 aa11.77□□□□□ -0.52
HLCS-202ENST00000399120 KAT5Q92993 513 aa11.77□□□□□ -0.52
HLCS-202ENST00000399120 C18orf25Q96B23 403 aaPredicted RBP11.77□□□□□ -0.52
HLCS-202ENST00000399120 CRELD1Q96HD1 420 aa11.77□□□□□ -0.52
HLCS-202ENST00000399120 ZNF184Q99676 751 aaPredicted RBP11.77□□□□□ -0.52
HLCS-202ENST00000399120 SEMA4BQ9NPR2 832 aaPredicted RBP11.77□□□□□ -0.52
HLCS-202ENST00000399120 SMPD4Q9NXE4 827 aa11.77□□□□□ -0.52
HLCS-202ENST00000399120 ARMCX1Q9P291 453 aa11.77□□□□□ -0.52
HLCS-202ENST00000399120 PGRMC2O15173 223 aa11.77□□□□□ -0.53
HLCS-202ENST00000399120 NDUFS2O75306 463 aa11.77□□□□□ -0.53
HLCS-202ENST00000399120 CAMTA2O94983 1202 aa11.77□□□□□ -0.53
HLCS-202ENST00000399120 PROCP04070 461 aa11.77□□□□□ -0.53
HLCS-202ENST00000399120 ANXA5P08758 320 aa11.77□□□□□ -0.53
HLCS-202ENST00000399120 IRF8Q02556 426 aa11.77□□□□□ -0.53
HLCS-202ENST00000399120 NANOGNBQ7Z5D8 188 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms