RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 RNASEH1O60930 286 aaKnown RBP13.33□□□□□ -0.27
PRAME-201ENST00000398741 FYNP06241 537 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 CHRNGP07510 517 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 UQCRBP14927 111 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 GLDCP23378 1020 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 YY1P25490 414 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 PIK3R1P27986 724 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 NMBRP28336 390 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 RPL14P50914 215 aaKnown RBP13.33□□□□□ -0.27
PRAME-201ENST00000398741 GALNT2Q10471 571 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 USP10Q14694 798 aaKnown RBP13.33□□□□□ -0.27
PRAME-201ENST00000398741 GRM3Q14832 879 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 UBXN11Q5T124 520 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 LDLRAD1Q5T700 205 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 LIPMQ5VYY2 423 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 ZYG11AQ6WRX3 759 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 RNF111Q6ZNA4 994 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 ARHGAP18Q8N392 663 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 GALNT15Q8N3T1 639 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 ARRDC4Q8NCT1 418 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 CENPKQ9BS16 269 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 TRIM4Q9C037 500 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 NMRK2Q9NPI5 230 aa13.33□□□□□ -0.27
PRAME-201ENST00000398741 CCDC78A2IDD5 438 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 MBLAC1A4D2B0 266 aaPredicted RBP13.33□□□□□ -0.28
PRAME-201ENST00000398741 C9IYK1 514 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 TK2O00142 265 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 HDAC3O15379 428 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 JCHAINP01591 159 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 USP17L7P0C7H9 530 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 GRIA4P48058 902 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 HK2P52789 917 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 PRKAA2P54646 552 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 AQP4P55087 323 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 GJA9P57773 515 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 ROR2Q01974 943 aaKnown RBP13.33□□□□□ -0.28
PRAME-201ENST00000398741 GRAMD1BQ3KR37 738 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 TWF2Q6IBS0 349 aaKnown RBP13.33□□□□□ -0.28
PRAME-201ENST00000398741 GPR142Q7Z601 462 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 SNX32Q86XE0 403 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 MFN1Q8IWA4 741 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.33□□□□□ -0.28
PRAME-201ENST00000398741 ACVR1CQ8NER5 493 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 TEKT5Q96M29 485 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 GPR22Q99680 433 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 APBA2Q99767 749 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 DRC3Q9H069 523 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 WDCPQ9H6R7 721 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 WDR55Q9H6Y2 383 aaPredicted RBP13.33□□□□□ -0.28
PRAME-201ENST00000398741 CNGB3Q9NQW8 809 aa13.33□□□□□ -0.28
PRAME-201ENST00000398741 PRPF19Q9UMS4 504 aaKnown RBP13.33□□□□□ -0.28
PRAME-201ENST00000398741 G3BP2Q9UN86 482 aaKnown RBP13.33□□□□□ -0.28
PRAME-201ENST00000398741 MYO18AQ92614 2054 aaKnown RBP13.32□□□□□ -0.28
PRAME-201ENST00000398741 I6L893 689 aaPredicted RBP13.32□□□□□ -0.28
PRAME-201ENST00000398741 MATN2O00339 956 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 TXNDC9O14530 226 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 GABRDO14764 452 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 PHGDHO43175 533 aaKnown RBP13.32□□□□□ -0.28
PRAME-201ENST00000398741 PIGNO95427 931 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 F2P00734 622 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 F9P00740 461 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 LRPAP1P30533 357 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 GLRBP48167 497 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 PRKAA1Q13131 559 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 MMEL1Q495T6 779 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 RASIP1Q5U651 963 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 KIAA0319Q5VV43 1072 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 CWF19L1Q69YN2 538 aaKnown RBP13.32□□□□□ -0.28
PRAME-201ENST00000398741 EP400NLQ6ZTU2 488 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 SDCCAG8Q86SQ7 713 aaPredicted RBP13.32□□□□□ -0.28
PRAME-201ENST00000398741 LINC00523Q86TU6 105 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 FAM35AQ86V20 835 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 KBTBD6Q86V97 674 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 KYQ8NBH2 561 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 SMG8Q8ND04 991 aaKnown RBP13.32□□□□□ -0.28
PRAME-201ENST00000398741 ICA1LQ8NDH6 482 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 COLEC11Q9BWP8 271 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 TKTL2Q9H0I9 626 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 RHOJQ9H4E5 214 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 ZNF408Q9H9D4 720 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 CRTAC1Q9NQ79 661 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 RRN3Q9NYV6 651 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 OR12D3Q9UGF7 316 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 RUVBL2Q9Y230 463 aaKnown RBP13.32□□□□□ -0.28
PRAME-201ENST00000398741 RGSL1A5PLK6 1076 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 PSMD3O43242 534 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 CABYRO75952 493 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 AMHP03971 560 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 SRGAP2BP0DMP2 458 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 DNAJB2P25686 324 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 EPHA3P29320 983 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 AVPR1AP37288 418 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 NUMBP49757 651 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 ZNF135P52742 658 aaPredicted RBP13.32□□□□□ -0.28
PRAME-201ENST00000398741 MSLNQ13421 630 aaPredicted RBP13.32□□□□□ -0.28
PRAME-201ENST00000398741 SLC12A1Q13621 1099 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 CYLC2Q14093 348 aaPredicted RBP13.32□□□□□ -0.28
PRAME-201ENST00000398741 MFSD10Q14728 455 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 LSM12Q3MHD2 195 aaKnown RBP13.32□□□□□ -0.28
PRAME-201ENST00000398741 NXNQ6DKJ4 435 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms