RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 FBXL12Q9NXK8 326 aa19.22■□□□□ 0.67
COLCA2-201ENST00000398035 FZD4Q9ULV1 537 aa19.22■□□□□ 0.67
COLCA2-201ENST00000398035 TPX2Q9ULW0 747 aaKnown RBP19.22■□□□□ 0.67
COLCA2-201ENST00000398035 DMDP11532 3685 aa19.22■□□□□ 0.67
COLCA2-201ENST00000398035 C1QTNF3-AMACRE9PGA6 284 aa19.21■□□□□ 0.67
COLCA2-201ENST00000398035 IL1BP01584 269 aa19.21■□□□□ 0.67
COLCA2-201ENST00000398035 ARHGAP25P42331 645 aa19.21■□□□□ 0.67
COLCA2-201ENST00000398035 PTGER3P43115 390 aa19.21■□□□□ 0.67
COLCA2-201ENST00000398035 DPYSL2Q16555 572 aa19.21■□□□□ 0.67
COLCA2-201ENST00000398035 PPP6R3Q5H9R7 873 aaPredicted RBP19.21■□□□□ 0.67
COLCA2-201ENST00000398035 ZNF354CQ86Y25 554 aa19.21■□□□□ 0.67
COLCA2-201ENST00000398035 PCDH20Q8N6Y1 951 aaKnown RBP19.21■□□□□ 0.67
COLCA2-201ENST00000398035 TMIEQ8NEW7 156 aa19.21■□□□□ 0.67
COLCA2-201ENST00000398035 PIGKQ92643 395 aa19.21■□□□□ 0.67
COLCA2-201ENST00000398035 PEBP4Q96S96 227 aa19.21■□□□□ 0.67
COLCA2-201ENST00000398035 SUSD2Q9UGT4 822 aa19.21■□□□□ 0.67
COLCA2-201ENST00000398035 PPM1HQ9ULR3 514 aa19.21■□□□□ 0.67
COLCA2-201ENST00000398035 METTL12A8MUP2 240 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 H3BRJ5 948 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 KHNYNO15037 678 aaKnown RBP19.2■□□□□ 0.66
COLCA2-201ENST00000398035 PROSCO94903 275 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 GNSP15586 552 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 GOT1P17174 413 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 NUMBP49757 651 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 SPA17Q15506 151 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 INO80DQ53TQ3 878 aaPredicted RBP19.2■□□□□ 0.66
COLCA2-201ENST00000398035 LINGO4Q6UY18 593 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 PRR23CQ6ZRP0 262 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 Q6ZVU0 165 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 CACUL1Q86Y37 369 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 TMTC1Q8IUR5 882 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 SLC35G2Q8TBE7 412 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 PACSIN1Q9BY11 444 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 PARD6AQ9NPB6 346 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 SPTLC3Q9NUV7 552 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 GPATCH2LQ9NWQ4 482 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 PILRBQ9UKJ0 227 aa19.2■□□□□ 0.66
COLCA2-201ENST00000398035 EP300Q09472 2414 aaPredicted RBP19.2■□□□□ 0.66
COLCA2-201ENST00000398035 RASA4BC9J798 803 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 K7ERQ8 282 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 MID1O15344 667 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 RASA4O43374 803 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 SMAD6O43541 496 aaKnown RBP19.19■□□□□ 0.66
COLCA2-201ENST00000398035 RNASEH2AO75792 299 aaKnown RBP19.19■□□□□ 0.66
COLCA2-201ENST00000398035 PRNPP04156 253 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 RARAP10276 462 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 GLDCP23378 1020 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 IL1R2P27930 398 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 CYLC1P35663 651 aaPredicted RBP19.19■□□□□ 0.66
COLCA2-201ENST00000398035 ACVRL1P37023 503 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 SSR1P43307 286 aaKnown RBP19.19■□□□□ 0.66
COLCA2-201ENST00000398035 ARF5P84085 180 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 CA9Q16790 459 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 KCNT1Q5JUK3 1230 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 PEAR1Q5VY43 1037 aaPredicted RBP19.19■□□□□ 0.66
COLCA2-201ENST00000398035 CYP4V2Q6ZWL3 525 aaPredicted RBP19.19■□□□□ 0.66
COLCA2-201ENST00000398035 FAM124AQ86V42 546 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 MAP7D3Q8IWC1 876 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 RGL4Q8IZJ4 473 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 OR2A12Q8NGT7 310 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 BTBD6Q96KE9 485 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 HSPA12BQ96MM6 686 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 KCTD15Q96SI1 283 aaPredicted RBP19.19■□□□□ 0.66
COLCA2-201ENST00000398035 KDM4CQ9H3R0 1056 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 CD93Q9NPY3 652 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 CWC15Q9P013 229 aaKnown RBP19.19■□□□□ 0.66
COLCA2-201ENST00000398035 IMPACTQ9P2X3 320 aa19.19■□□□□ 0.66
COLCA2-201ENST00000398035 EVLQ9UI08 416 aaPredicted RBP19.19■□□□□ 0.66
COLCA2-201ENST00000398035 MYO18AQ92614 2054 aaKnown RBP19.19■□□□□ 0.66
COLCA2-201ENST00000398035 OTOGLQ3ZCN5 2332 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 ARHGAP42A6NI28 874 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 LRRC72A6NJI9 287 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 SLC7A4O43246 635 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 BUB1O43683 1085 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 BNIP3LO60238 219 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 SEMA4FO95754 770 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 KRT7P08729 469 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 VAV1P15498 845 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 ERCC2P18074 760 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 ITPKAP23677 461 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 CHRNA3P32297 505 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 MAN1A1P33908 653 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 SERINC3Q13530 473 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 TCEAL1Q15170 157 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 DUOXA1Q1HG43 343 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 CARD16Q5EG05 197 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 C22orf39Q6P5X5 142 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 ARMCX6Q7L4S7 300 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 SLC41A1Q8IVJ1 513 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 HDDC3Q8N4P3 179 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 DNASE2BQ8WZ79 361 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 HSPH1Q92598 858 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 LRIG1Q96JA1 1093 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 NUSAP1Q9BXS6 441 aaKnown RBP19.18■□□□□ 0.66
COLCA2-201ENST00000398035 NEUROG2Q9H2A3 272 aa19.18■□□□□ 0.66
COLCA2-201ENST00000398035 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.18■□□□□ 0.66
COLCA2-201ENST00000398035 RCOR3Q9P2K3 495 aaPredicted RBP19.18■□□□□ 0.66
COLCA2-201ENST00000398035 FAM186AA6NE01 2351 aa19.17■□□□□ 0.66
COLCA2-201ENST00000398035 MEI4A8MW99 385 aa19.17■□□□□ 0.66
COLCA2-201ENST00000398035 GOLGA6L6A8MZA4 724 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms