RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CELF6Q96J87 481 aaKnown RBP25.91■■□□□ 1.74
TSPAN4-207ENST00000397411 DUSP15Q9H1R2 295 aaPredicted RBP25.91■■□□□ 1.74
TSPAN4-207ENST00000397411 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 IGHV1OR15-9A0A0B4J2B8 117 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 ZSCAN5CA6NGD5 496 aaPredicted RBP25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 ARHGAP42A6NI28 874 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 SMAD6O43541 496 aaKnown RBP25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 ZMPSTE24O75844 475 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 IL1BP01584 269 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 AMPD1P23109 780 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 DHPSP49366 369 aaPredicted RBP25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 TPMTP51580 245 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 NAP1L1P55209 391 aaKnown RBP25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 ELAVL3Q14576 367 aaKnown RBP25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 TCEAL1Q15170 157 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 POLNQ7Z5Q5 900 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 KIAA1328Q86T90 577 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 CPNE8Q86YQ8 564 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 TMEFF1Q8IYR6 380 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 DEFB119Q8N690 84 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 HMCESQ96FZ2 354 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 FAM129BQ96TA1 746 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 CALN1Q9BXU9 219 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 GRPEL1Q9HAV7 217 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 PCDH18Q9HCL0 1135 aa25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 MBD1Q9UIS9 605 aaPredicted RBP25.9■■□□□ 1.74
TSPAN4-207ENST00000397411 RETP07949 1114 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 TNNT1P13805 278 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 CD6P30203 668 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 SLC1A1P43005 524 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 PSMD8P48556 350 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 SERPINH1P50454 418 aaKnown RBP25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 TAS2R40P59535 323 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 ARF5P84085 180 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 CST6Q15828 149 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 ATP13A4Q4VNC1 1196 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 TMCO3Q6UWJ1 677 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 LEKR1Q6ZMV7 388 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 LZTR1Q8N653 840 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 LOXL4Q96JB6 756 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 OMDQ99983 421 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 TNKS2Q9H2K2 1166 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 NOL6Q9H6R4 1146 aaKnown RBP25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 USP36Q9P275 1121 aaKnown RBP25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 SCML1Q9UN30 329 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 TFR2Q9UP52 801 aa25.89■■□□□ 1.74
TSPAN4-207ENST00000397411 DFFAO00273 331 aa25.88■■□□□ 1.73
TSPAN4-207ENST00000397411 SPOPO43791 374 aa25.88■■□□□ 1.73
TSPAN4-207ENST00000397411 SLC8A1P32418 973 aa25.88■■□□□ 1.73
TSPAN4-207ENST00000397411 PDK2Q15119 407 aa25.88■■□□□ 1.73
TSPAN4-207ENST00000397411 FAM46CQ5VWP2 391 aa25.88■■□□□ 1.73
TSPAN4-207ENST00000397411 C22orf39Q6P5X5 142 aa25.88■■□□□ 1.73
TSPAN4-207ENST00000397411 TXLNBQ8N3L3 684 aa25.88■■□□□ 1.73
TSPAN4-207ENST00000397411 TOE1Q96GM8 510 aaKnown RBP25.88■■□□□ 1.73
TSPAN4-207ENST00000397411 CSPG4P5Q96PW8 444 aa25.88■■□□□ 1.73
TSPAN4-207ENST00000397411 CEP44Q9C0F1 390 aa25.88■■□□□ 1.73
TSPAN4-207ENST00000397411 PABPC3Q9H361 631 aaKnown RBP25.88■■□□□ 1.73
TSPAN4-207ENST00000397411 CD93Q9NPY3 652 aa25.88■■□□□ 1.73
TSPAN4-207ENST00000397411 FCF1Q9Y324 198 aaKnown RBP25.88■■□□□ 1.73
TSPAN4-207ENST00000397411 CHD5Q8TDI0 1954 aa25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 RALGAPA1Q6GYQ0 2036 aa25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 MID1O15344 667 aa25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 ADH1BP00325 375 aa25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 PAPOLAP51003 745 aaKnown RBP25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 CREB5Q02930 508 aa25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 SERINC3Q13530 473 aa25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 DPYSQ14117 519 aa25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 PMS2CLQ68D20 193 aa25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 ARMCX6Q7L4S7 300 aa25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 RYBPQ8N488 228 aaPredicted RBP25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 ACRBPQ8NEB7 543 aa25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 SLC39A8Q9C0K1 460 aa25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 KLHL11Q9NVR0 708 aa25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 FBXL12Q9NXK8 326 aa25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 RCOR3Q9P2K3 495 aaPredicted RBP25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 ACTL7AQ9Y615 435 aa25.87■■□□□ 1.73
TSPAN4-207ENST00000397411 CEP192Q8TEP8 1941 aa25.86■■□□□ 1.73
TSPAN4-207ENST00000397411 PLXND1Q9Y4D7 1925 aa25.86■■□□□ 1.73
TSPAN4-207ENST00000397411 A0A0A6YYK5 440 aaPredicted RBP25.86■■□□□ 1.73
TSPAN4-207ENST00000397411 CXorf51AA0A1B0GTR3 108 aa25.86■■□□□ 1.73
TSPAN4-207ENST00000397411 C1QTNF3-AMACRE9PGA6 284 aa25.86■■□□□ 1.73
TSPAN4-207ENST00000397411 MCF2LO15068 1137 aa25.86■■□□□ 1.73
TSPAN4-207ENST00000397411 ALOX15BO15296 676 aa25.86■■□□□ 1.73
TSPAN4-207ENST00000397411 C5AR1P21730 350 aa25.86■■□□□ 1.73
TSPAN4-207ENST00000397411 DCLK2Q8N568 766 aa25.86■■□□□ 1.73
TSPAN4-207ENST00000397411 PCDH20Q8N6Y1 951 aaKnown RBP25.86■■□□□ 1.73
TSPAN4-207ENST00000397411 GPR174Q9BXC1 333 aa25.86■■□□□ 1.73
TSPAN4-207ENST00000397411 ARRDC1-AS1Q9H2J1 176 aa25.86■■□□□ 1.73
TSPAN4-207ENST00000397411 LRRC19Q9H756 370 aa25.86■■□□□ 1.73
TSPAN4-207ENST00000397411 WSB2Q9NYS7 404 aaPredicted RBP25.86■■□□□ 1.73
TSPAN4-207ENST00000397411 ZFHX2Q9C0A1 2572 aaPredicted RBP25.85■■□□□ 1.73
TSPAN4-207ENST00000397411 RNASEH2AO75792 299 aaKnown RBP25.85■■□□□ 1.73
TSPAN4-207ENST00000397411 COMTP21964 271 aa25.85■■□□□ 1.73
TSPAN4-207ENST00000397411 CHRNA3P32297 505 aa25.85■■□□□ 1.73
TSPAN4-207ENST00000397411 HADHBP55084 474 aaKnown RBP25.85■■□□□ 1.73
TSPAN4-207ENST00000397411 MMRN1Q13201 1228 aa25.85■■□□□ 1.73
TSPAN4-207ENST00000397411 CARD16Q5EG05 197 aa25.85■■□□□ 1.73
TSPAN4-207ENST00000397411 SPDYCQ5MJ68 293 aa25.85■■□□□ 1.73
TSPAN4-207ENST00000397411 HDDC3Q8N4P3 179 aa25.85■■□□□ 1.73
TSPAN4-207ENST00000397411 CASKIN2Q8WXE0 1202 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms