RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 GDF3Q9NR23 364 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 ARHGEF3Q9NR81 526 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 IPO11Q9UI26 975 aaKnown RBP17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 CLEC4EQ9ULY5 219 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 UTP11Q9Y3A2 253 aaKnown RBP17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 C5orf60A6NFR6 353 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 CYP17A1P05093 508 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 RPL22P35268 128 aaKnown RBP17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 CLCN6P51797 869 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 WASHC5Q12768 1159 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 CDH18Q13634 790 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 TRADDQ15628 312 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 FAM182AQ5T1J6 154 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 TRIM68Q6AZZ1 485 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 MFN1Q8IWA4 741 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 CCDC89Q8N998 374 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 OR7D4Q8NG98 312 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 FIBINQ8TAL6 211 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 RUBCNQ92622 972 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 FATE1Q969F0 183 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 FAM83CQ9BQN1 747 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 BBS2Q9BXC9 721 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 ACE2Q9BYF1 805 aaPredicted RBP17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 MTF2Q9Y483 593 aaPredicted RBP17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 OR51B4Q9Y5P0 310 aa17.3■□□□□ 0.36
TSPAN4-205ENST00000397406 ESYT3A0FGR9 886 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 NEDD8-MDP1E9PL57 170 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 J3KR12 359 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 KCNK1O00180 336 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 RNF103O00237 685 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 MTSS1O43312 755 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 ECI2O75521 394 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 GCATO75600 419 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 PEX11BO96011 259 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 DCNP07585 359 aaKnown RBP17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 ARSAP15289 507 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 PTPN3P26045 913 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 RPL21P46778 160 aaKnown RBP17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 VPS41P49754 854 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 DRG2P55039 364 aaKnown RBP17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 STARD6P59095 220 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 DHCR24Q15392 516 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 P3H1Q32P28 736 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 RNF219Q5W0B1 726 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 TIGD7Q6NT04 549 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 WDR93Q6P2C0 686 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 MTSS1LQ765P7 747 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 DTWD2Q8NBA8 298 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 CCHCR1Q8TD31 782 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 CASKIN2Q8WXE0 1202 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 MAML1Q92585 1016 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 ATOH1Q92858 354 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 ALG14Q96F25 216 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 ZFYVE19Q96K21 471 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 LMLNQ96KR4 655 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 PARD6BQ9BYG5 372 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 TRIM31Q9BZY9 425 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 DPH5Q9H2P9 285 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 THG1LQ9NWX6 298 aaKnown RBP17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 ASIC3Q9UHC3 531 aa17.29■□□□□ 0.36
TSPAN4-205ENST00000397406 VPS13AQ96RL7 3174 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 A0A0A0MRY4 1105 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 MATN3O15232 486 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 PRAMEF11O60813 436 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 TYRP14679 529 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 MZF1P28698 734 aaPredicted RBP17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 ETFBP38117 255 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 VSNL1P62760 191 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 IFI35P80217 286 aaPredicted RBP17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 IL10RBQ08334 325 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 ZBTB17Q13105 803 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 PDGFRLQ15198 375 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 ANO4Q32M45 955 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 IFT20Q8IY31 132 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 CCDC110Q8TBZ0 833 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 ATP2A3Q93084 1043 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 SPATA13Q96N96 652 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 FERMT1Q9BQL6 677 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 FEM1AQ9BSK4 669 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 PDFQ9HBH1 243 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 GRHL1Q9NZI5 618 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 SEPT10Q9P0V9 454 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 PAK5Q9P286 719 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 RAB21Q9UL25 225 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 SNX24Q9Y343 169 aa17.28■□□□□ 0.36
TSPAN4-205ENST00000397406 TICRRQ7Z2Z1 1910 aa17.27■□□□□ 0.36
TSPAN4-205ENST00000397406 HOXC11O43248 304 aaPredicted RBP17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 KDELR3O43731 214 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 NFATC1O95644 943 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 PSMC3P17980 439 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 CD72P21854 359 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 TNFRSF8P28908 595 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 ADCY8P40145 1251 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 CSKP41240 450 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 LMAN2Q12907 356 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 GPS1Q13098 491 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 GRM2Q14416 872 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 SLC44A4Q53GD3 710 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 ANKRD20A2Q5SQ80 823 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 ANKRD20A1Q5TYW2 823 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms