RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ELF2Q15723 593 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 NCBP2-AS2Q69YL0 99 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 DRICH1Q6PGQ1 229 aaPredicted RBP13.57□□□□□ -0.24
SEC13-209ENST00000397117 GSTA5Q7RTV2 222 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 C14orf80Q86SX3 495 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 DDX42Q86XP3 938 aaKnown RBP eCLIP13.57□□□□□ -0.24
SEC13-209ENST00000397117 ZFRQ96KR1 1074 aaKnown RBP13.57□□□□□ -0.24
SEC13-209ENST00000397117 TDP1Q9NUW8 608 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 ETNK2Q9NVF9 386 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 DONSONQ9NYP3 566 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 SH3BP1Q9Y3L3 701 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 FRYQ5TBA9 3013 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 H7C0C1 242 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 DCLK1O15075 740 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 TTI1O43156 1089 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 LATS1O95835 1130 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 GAS8O95995 478 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 PROS1P07225 676 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 TACR2P21452 398 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 DRD1P21728 446 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 ATP5OP48047 213 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 SLC7A5Q01650 507 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 GBE1Q04446 702 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 NOMO1Q15155 1222 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 PPP1R7Q15435 360 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 MANEALQ5VSG8 457 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 FBXL22Q6P050 247 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 DARS2Q6PI48 645 aaKnown RBP13.57□□□□□ -0.24
SEC13-209ENST00000397117 RPRD1AQ96P16 312 aaPredicted RBP13.57□□□□□ -0.24
SEC13-209ENST00000397117 PRMT1Q99873 361 aaKnown RBP13.57□□□□□ -0.24
SEC13-209ENST00000397117 ZYG11BQ9C0D3 744 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 KIF9Q9HAQ2 790 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 CFAP97Q9P2B7 532 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 PPARGC1AQ9UBK2 798 aaKnown RBP13.57□□□□□ -0.24
SEC13-209ENST00000397117 AGO1Q9UL18 857 aaKnown RBP13.57□□□□□ -0.24
SEC13-209ENST00000397117 ARHGAP26Q9UNA1 814 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 DRG1Q9Y295 367 aaKnown RBP13.57□□□□□ -0.24
SEC13-209ENST00000397117 ZNF510Q9Y2H8 683 aa13.57□□□□□ -0.24
SEC13-209ENST00000397117 UTP11Q9Y3A2 253 aaKnown RBP13.57□□□□□ -0.24
SEC13-209ENST00000397117 LAMA1P25391 3075 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 GOLGA6L7A0A1B0GV03 622 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 TARSL2A2RTX5 802 aaKnown RBP13.56□□□□□ -0.24
SEC13-209ENST00000397117 FAM187AA6NFU0 413 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 MFSD11O43934 449 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 HEXIM1O94992 359 aaKnown RBP13.56□□□□□ -0.24
SEC13-209ENST00000397117 KLKB1P03952 638 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 ITGAVP06756 1048 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 RBP3P10745 1247 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 GJA4P35212 333 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 PAFAH1B3Q15102 231 aaKnown RBP13.56□□□□□ -0.24
SEC13-209ENST00000397117 FBXO43Q4G163 708 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 RABGAP1LQ5R372 815 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 ADGRF1Q5T601 910 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 RNF43Q68DV7 783 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 NAIF1Q69YI7 327 aaPredicted RBP13.56□□□□□ -0.24
SEC13-209ENST00000397117 NADSYN1Q6IA69 706 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 TCEAL6Q6IPX3 200 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 SYDE1Q6ZW31 735 aaPredicted RBP13.56□□□□□ -0.24
SEC13-209ENST00000397117 SYT13Q7L8C5 426 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 ZC3H18Q86VM9 953 aaKnown RBP13.56□□□□□ -0.24
SEC13-209ENST00000397117 LGI2Q8N0V4 545 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 SLC35B2Q8TB61 432 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 EZH1Q92800 747 aaPredicted RBP13.56□□□□□ -0.24
SEC13-209ENST00000397117 TCEAL3Q969E4 200 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 HHIPQ96QV1 700 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 P2RY13Q9BPV8 354 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 RAB17Q9H0T7 212 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 DTLQ9NZJ0 730 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 EBF1Q9UH73 591 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 RALYQ9UKM9 306 aaKnown RBP13.56□□□□□ -0.24
SEC13-209ENST00000397117 MFHAS1Q9Y4C4 1052 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 RAD54BQ9Y620 910 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 ATRXP46100 2492 aa13.56□□□□□ -0.24
SEC13-209ENST00000397117 IGF2RP11717 2491 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 BAHCC1Q9P281 2608 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 BCLAF3A2AJT9 711 aaKnown RBP13.55□□□□□ -0.24
SEC13-209ENST00000397117 SGK1O00141 431 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 LEFTY2O00292 366 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 PPP1R12AO14974 1030 aaPredicted RBP13.55□□□□□ -0.24
SEC13-209ENST00000397117 RRP9O43818 475 aaKnown RBP13.55□□□□□ -0.24
SEC13-209ENST00000397117 RHOBTB1O94844 696 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 MAP3K6O95382 1288 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 RHOQP17081 205 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 MCM3P25205 808 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 XRCC4Q13426 336 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 PDK1Q15118 436 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 PDGFRLQ15198 375 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 OASLQ15646 514 aaKnown RBP13.55□□□□□ -0.24
SEC13-209ENST00000397117 FAM133BQ5BKY9 247 aaKnown RBP13.55□□□□□ -0.24
SEC13-209ENST00000397117 PSAPL1Q6NUJ1 521 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 RFWD3Q6PCD5 774 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 JAMLQ86YT9 394 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 CDKL3Q8IVW4 592 aaPredicted RBP13.55□□□□□ -0.24
SEC13-209ENST00000397117 LZTR1Q8N653 840 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 RTL3Q8N8U3 475 aaKnown RBP13.55□□□□□ -0.24
SEC13-209ENST00000397117 SLCO2A1Q92959 643 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 FERMT1Q9BQL6 677 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 TMEM121Q9BTD3 319 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 ANKZF1Q9H8Y5 726 aa13.55□□□□□ -0.24
SEC13-209ENST00000397117 MPP6Q9NZW5 540 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms