RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 MAMDC4Q6UXC1 1216 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 PID1Q7Z2X4 250 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 CEP97Q8IW35 865 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 NUP93Q8N1F7 819 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 CPSF7Q8N684 471 aaKnown RBP14.18□□□□□ -0.14
NUP98-204ENST00000397004 SLC2A14Q8TDB8 520 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 AFG1LQ8WV93 481 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 GPR78Q96P69 363 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 ACE2Q9BYF1 805 aaPredicted RBP14.18□□□□□ -0.14
NUP98-204ENST00000397004 ZNF696Q9H7X3 374 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 IGSF9Q9P2J2 1179 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 SHROOM3Q8TF72 1996 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 ZNF286BP0CG31 522 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 SLC35E2BP0CK96 405 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 ZFXP17010 805 aaPredicted RBP14.18□□□□□ -0.14
NUP98-204ENST00000397004 EPHX2P34913 555 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 RPL26P61254 145 aaKnown RBP14.18□□□□□ -0.14
NUP98-204ENST00000397004 MARCH8Q5T0T0 291 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 NT5C3BQ969T7 300 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 OMDQ99983 421 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 DRC3Q9H069 523 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 PTTG2Q9NZH5 202 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 CEPT1Q9Y6K0 416 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 MYLKQ15746 1914 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 PDLIM1O00151 329 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 HBP1O60381 514 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 SERPINB8P50452 374 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 NRF1Q16656 503 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 KIZQ2M2Z5 673 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 IFNLR1Q8IU57 520 aaPredicted RBP14.18□□□□□ -0.14
NUP98-204ENST00000397004 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.18□□□□□ -0.14
NUP98-204ENST00000397004 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.18□□□□□ -0.14
NUP98-204ENST00000397004 DPF3Q92784 378 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 VPS39Q96JC1 886 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 SLC29A1Q99808 456 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 SEMA6AQ9H2E6 1030 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 GOLGA2P5Q9HBQ8 144 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 ZBTB26Q9HCK0 441 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 GALNT8Q9NY28 637 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 VANGL2Q9ULK5 521 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 AKT3Q9Y243 479 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.18□□□□□ -0.14
NUP98-204ENST00000397004 TLL2Q9Y6L7 1015 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 HACD1B0YJ81 288 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 HDAC3O15379 428 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 PENKP01210 267 aaPredicted RBP14.17□□□□□ -0.14
NUP98-204ENST00000397004 CTBSQ01459 385 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 SPANXN3Q5MJ09 141 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 ARHGAP17Q68EM7 881 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 ANKRD52Q8NB46 1076 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 KCTD4Q8WVF5 259 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 OSBPL2Q9H1P3 480 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 WDR41Q9HAD4 459 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 CASS4Q9NQ75 786 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 IARS2Q9NSE4 1012 aaKnown RBP14.17□□□□□ -0.14
NUP98-204ENST00000397004 DNAJC25-GNG10A0A024R161 153 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 hCG_2014768A0A024R1R8 64 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 DLX3O60479 287 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 BCAS2O75934 225 aaPredicted RBP14.17□□□□□ -0.14
NUP98-204ENST00000397004 CSPG5O95196 566 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 SAT1P21673 171 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 MATKP42679 507 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 MGAT5BQ3V5L5 792 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 DCAF6Q58WW2 860 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 BNC2Q6ZN30 1099 aaPredicted RBP14.17□□□□□ -0.14
NUP98-204ENST00000397004 PAQR9Q6ZVX9 377 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 ZNF410Q86VK4 478 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 KDM1BQ8NB78 822 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 LENG1Q96BZ8 264 aaPredicted RBP14.17□□□□□ -0.14
NUP98-204ENST00000397004 TMEM30AQ9NV96 361 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.17□□□□□ -0.14
NUP98-204ENST00000397004 VPS28Q9UK41 221 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 SLC39A10Q9ULF5 831 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 RAB26Q9ULW5 256 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 TXNP10599 105 aaKnown RBP14.17□□□□□ -0.14
NUP98-204ENST00000397004 THRAP10827 490 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 RPL14P50914 215 aaKnown RBP14.17□□□□□ -0.14
NUP98-204ENST00000397004 SCNN1BP51168 640 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 CYLC2Q14093 348 aaPredicted RBP14.17□□□□□ -0.14
NUP98-204ENST00000397004 SLC25A52Q3SY17 297 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 FSCBQ5H9T9 825 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 SMARCAD1Q9H4L7 1026 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 MTF2Q9Y483 593 aaPredicted RBP14.17□□□□□ -0.14
NUP98-204ENST00000397004 PCDHGA7Q9Y5G6 932 aa14.17□□□□□ -0.14
NUP98-204ENST00000397004 TMEM114B3SHH9 223 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 AP2A1O95782 977 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 PGK1P00558 417 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 RGS2P41220 211 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 SULT1E1P49888 294 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 TMEM62Q0P6H9 643 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 ADIGQ0VDE8 80 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 NAB1Q13506 487 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 CHERPQ8IWX8 916 aaKnown RBP14.16□□□□□ -0.14
NUP98-204ENST00000397004 FSTL5Q8N475 847 aaPredicted RBP14.16□□□□□ -0.14
NUP98-204ENST00000397004 NLRP7Q8WX94 980 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 FTHL17Q9BXU8 183 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 ILKAPQ9H0C8 392 aaPredicted RBP14.16□□□□□ -0.14
NUP98-204ENST00000397004 PRPF19Q9UMS4 504 aaKnown RBP14.16□□□□□ -0.14
NUP98-204ENST00000397004 RAP2CQ9Y3L5 183 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 MRPL42Q9Y6G3 142 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms