RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 FAM72CH0Y354 149 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 VILLO15195 856 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 RFC1P35251 1148 aaPredicted RBP18.74■□□□□ 0.59
FXN-203ENST00000396366 ADRA1BP35368 520 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 ZNF423Q2M1K9 1284 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 C6orf118Q5T5N4 469 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 FAM72AQ5TYM5 149 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 AGBL4Q5VU57 503 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 FAM72DQ6L9T8 149 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 RAB44Q7Z6P3 723 aaPredicted RBP18.74■□□□□ 0.59
FXN-203ENST00000396366 DSG4Q86SJ6 1040 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 FAM72BQ86X60 149 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 DRC7Q8IY82 874 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 CHST14Q8NCH0 376 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 ANKRD20A12PQ8NF67 263 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 BAHD1Q8TBE0 780 aaPredicted RBP18.74■□□□□ 0.59
FXN-203ENST00000396366 GATA6Q92908 595 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 ERGIC2Q96RQ1 377 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 C2orf49Q9BVC5 232 aaPredicted RBP18.74■□□□□ 0.59
FXN-203ENST00000396366 ACE2Q9BYF1 805 aaPredicted RBP18.74■□□□□ 0.59
FXN-203ENST00000396366 ZYG11BQ9C0D3 744 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 TNKS2Q9H2K2 1166 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 NDFIP2Q9NV92 336 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 ADAM22Q9P0K1 906 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 ARHGAP20Q9P2F6 1191 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 PCDHGB2Q9Y5G2 931 aa18.74■□□□□ 0.59
FXN-203ENST00000396366 ZZEF1O43149 2961 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 A0A1W2PR77 199 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 CBX4O00257 560 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 TEX33O43247 280 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 ZNF821O75541 412 aaPredicted RBP18.73■□□□□ 0.59
FXN-203ENST00000396366 ZMPSTE24O75844 475 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 MBD3O95983 291 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 SDC4P31431 198 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 NSFP46459 744 aaKnown RBP18.73■□□□□ 0.59
FXN-203ENST00000396366 C21orf59P57076 290 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 TAS2R38P59533 333 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 ANO6Q4KMQ2 910 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 FAM46CQ5VWP2 391 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 TRIM72Q6ZMU5 477 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 PHF13Q86YI8 300 aaPredicted RBP18.73■□□□□ 0.59
FXN-203ENST00000396366 CCDC185Q8N715 623 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 DCAF4L2Q8NA75 395 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 SERAC1Q96JX3 654 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 AGPAT1Q99943 283 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 SEPT11Q9NVA2 429 aaKnown RBP18.73■□□□□ 0.59
FXN-203ENST00000396366 OR12D3Q9UGF7 316 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 DAAM1Q9Y4D1 1078 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 NEUROG3Q9Y4Z2 214 aa18.73■□□□□ 0.59
FXN-203ENST00000396366 ILVBLA1L0T0 632 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 GOLGA8CPA6NN73 597 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 ALOX15BO15296 676 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 FLRT2O43155 660 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 LATO43561 262 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 PLRG1O43660 514 aaKnown RBP18.72■□□□□ 0.59
FXN-203ENST00000396366 ATXN1LP0C7T5 689 aaKnown RBP18.72■□□□□ 0.59
FXN-203ENST00000396366 KRT3P12035 628 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 CD38P28907 300 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 CHRNA3P32297 505 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 ACVRL1P37023 503 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 HDAC4P56524 1084 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 SHBQ15464 509 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 PIP5KL1Q5T9C9 394 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 WDR59Q6PJI9 974 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 GATAD2AQ86YP4 633 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 FAM172AQ8WUF8 416 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 CENPIQ92674 756 aaPredicted RBP18.72■□□□□ 0.59
FXN-203ENST00000396366 ARRDC3Q96B67 414 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 ATP13A1Q9HD20 1204 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 TMEM51Q9NW97 253 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 TOR4AQ9NXH8 423 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 PPARGC1AQ9UBK2 798 aaKnown RBP18.72■□□□□ 0.59
FXN-203ENST00000396366 CA5BQ9Y2D0 317 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 MSRB2Q9Y3D2 182 aa18.72■□□□□ 0.59
FXN-203ENST00000396366 C1QTNF3-AMACRE9PGA6 284 aa18.71■□□□□ 0.59
FXN-203ENST00000396366 KPNA3O00505 521 aaPredicted RBP18.71■□□□□ 0.59
FXN-203ENST00000396366 TRIM16O95361 564 aa18.71■□□□□ 0.59
FXN-203ENST00000396366 PTPN9P43378 593 aa18.71■□□□□ 0.59
FXN-203ENST00000396366 CCT8P50990 548 aa18.71■□□□□ 0.59
FXN-203ENST00000396366 ARF5P84085 180 aa18.71■□□□□ 0.59
FXN-203ENST00000396366 GNA12Q03113 381 aa18.71■□□□□ 0.59
FXN-203ENST00000396366 SUZ12Q15022 739 aaKnown RBP18.71■□□□□ 0.59
FXN-203ENST00000396366 ARSIQ5FYB1 569 aa18.71■□□□□ 0.59
FXN-203ENST00000396366 ACBD5Q5T8D3 534 aaPredicted RBP18.71■□□□□ 0.59
FXN-203ENST00000396366 MANEALQ5VSG8 457 aa18.71■□□□□ 0.59
FXN-203ENST00000396366 RWDD4Q6NW29 188 aaKnown RBP18.71■□□□□ 0.59
FXN-203ENST00000396366 C22orf39Q6P5X5 142 aa18.71■□□□□ 0.59
FXN-203ENST00000396366 DPY19L3Q6ZPD9 716 aa18.71■□□□□ 0.59
FXN-203ENST00000396366 GLRX5Q86SX6 157 aa18.71■□□□□ 0.59
FXN-203ENST00000396366 ADAMTS14Q8WXS8 1223 aa18.71■□□□□ 0.59
FXN-203ENST00000396366 DNAI1Q9UI46 699 aa18.71■□□□□ 0.59
FXN-203ENST00000396366 ZFHX4Q86UP3 3567 aa18.71■□□□□ 0.59
FXN-203ENST00000396366 A0A1B0GTQ1 180 aa18.7■□□□□ 0.58
FXN-203ENST00000396366 TCRBV5S1A1TA0A578 114 aa18.7■□□□□ 0.58
FXN-203ENST00000396366 FAM221BA6H8Z2 402 aa18.7■□□□□ 0.58
FXN-203ENST00000396366 SLC7A4O43246 635 aa18.7■□□□□ 0.58
FXN-203ENST00000396366 CD160O95971 181 aa18.7■□□□□ 0.58
FXN-203ENST00000396366 GPD1P21695 349 aa18.7■□□□□ 0.58
FXN-203ENST00000396366 ARL13BQ3SXY8 428 aa18.7■□□□□ 0.58
FXN-203ENST00000396366 ZNF783Q6ZMS7 281 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms