RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 B3GNT6Q6ZMB0 384 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 NCCRP1Q6ZVX7 275 aaPredicted RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 PIGZQ86VD9 579 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 CHSY1Q86X52 802 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 UMODL1-AS1Q8N2C9 162 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 GAB3Q8WWW8 586 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 ZNF75CPQ92670 426 aaPredicted RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 TTC17Q96AE7 1141 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 ZNF599Q96NL3 588 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 DPEP3Q9H4B8 488 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 FBXO44Q9H4M3 255 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 EBF3Q9H4W6 596 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 INIPQ9NRY2 104 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 ABCC13Q9NSE7 274 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 MARCH5Q9NX47 278 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 TBK1Q9UHD2 729 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 RABGEF1Q9UJ41 708 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 PAIP2BQ9ULR5 123 aaKnown RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 SSX2IPQ9Y2D8 614 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 SCN5AQ14524 2016 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 MYLKQ15746 1914 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 MAGEB16A2A368 324 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 FAM159BA6NKW6 160 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 H3BRJ5 948 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 ENPP3O14638 875 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 BIRC5O15392 142 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 PRPSAP2O60256 369 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 E2F6O75461 281 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 ABLIM3O94929 683 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 INHAP05111 366 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 LINC00271P0C7V0 271 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 SMIM18P0DKX4 95 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 HARSP12081 509 aaKnown RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 CCNCP24863 283 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 SERPINB3P29508 390 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 RPL22P35268 128 aaKnown RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 ADRA1BP35368 520 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 KCNJ1P48048 391 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 NDST2P52849 883 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 ACTR3P61158 418 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 XIAPP98170 497 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 GPR17Q13304 367 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 SLC1A5Q15758 541 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 KLHL38Q2WGJ6 581 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 MAP7D1Q3KQU3 841 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 FAM102AQ5T9C2 384 aaPredicted RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 TPGS2Q68CL5 300 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 TMEM92Q6UXU6 159 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 ACOT1Q86TX2 421 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 METTL23Q86XA0 190 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 DCP1BQ8IZD4 617 aaKnown RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 TMCO5AQ8N6Q1 288 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 PIP4K2CQ8TBX8 421 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 ACTL9Q8TC94 416 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 SPPL2BQ8TCT7 592 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 URGCPQ8TCY9 931 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 MCUR1Q96AQ8 359 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 PCED1BQ96HM7 432 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 KCTD15Q96SI1 283 aaPredicted RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 ZIC5Q96T25 663 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 IL12RB2Q99665 862 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 KCNK13Q9HB14 408 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 MTRRQ9UBK8 725 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 NXF1Q9UBU9 619 aaKnown RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 ANAPC5Q9UJX4 755 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 PLA2G4CQ9UP65 541 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 COLQQ9Y215 455 aaPredicted RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 LZTS1Q9Y250 596 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 COL4A2P08572 1712 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 A0A0A0MRY4 1105 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 MCF2LO15068 1137 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 TM9SF1O15321 606 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 IRAK2O43187 625 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 OR6B1O95007 311 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 VNN2O95498 520 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 UQCRBP14927 111 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 CD53P19397 219 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 RPA3P35244 121 aaPredicted RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 HADHAP40939 763 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 CLCN2P51788 898 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 CLCNKBP51801 687 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 OXCT1P55809 520 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 OTUD4Q01804 1114 aaKnown RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 GSTM4Q03013 218 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 NIPAL4Q0D2K0 466 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 TRMT5Q32P41 509 aaKnown RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS41-203ENST00000395969 FYB2Q5VWT5 728 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 CNKSR3Q6P9H4 555 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 UGT2A3Q6UWM9 527 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 CXCL17Q6UXB2 119 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 C3orf62Q6ZUJ4 267 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 CENPUQ71F23 418 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 PDZD4Q76G19 769 aaPredicted RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 SCUBE1Q8IWY4 988 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 ZBED8Q8IZ13 594 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 THEM5Q8N1Q8 247 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 ARHGAP24Q8N264 748 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 OR6Y1Q8NGX8 325 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 RFWD2Q8NHY2 731 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms