RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ZNF839A8K0R7 811 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ZW10O43264 779 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 C1RP00736 705 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SERPINE1P05121 402 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ALADP13716 330 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SLC9A4Q6AI14 798 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 PTRHD1Q6GMV3 140 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 LRRC8BQ6P9F7 803 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 STRA8Q7Z7C7 330 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SRLQ86TD4 932 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 JADE3Q92613 823 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 NOP53Q9NZM5 478 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 TRMT6Q9UJA5 497 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 RALGAPA2Q2PPJ7 1873 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SPECC1L-ADORA2AF8WAN1 911 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 MATN3O15232 486 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 PAPSS1O43252 624 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 DIAPH2O60879 1101 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 IPO13O94829 963 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 IL2P60568 153 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 IL10RBQ08334 325 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 TRIP4Q15650 581 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 PAN2Q504Q3 1202 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SLC39A12Q504Y0 691 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 NEPROQ6NW34 567 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 C16orf89Q6UX73 402 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ARID3BQ8IVW6 561 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 IPMKQ8NFU5 416 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 UHMK1Q8TAS1 419 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 PCYT2Q99447 389 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 PRMT1Q99873 361 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SPATA16Q9BXB7 569 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 KIF9Q9HAQ2 790 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 GPAMQ9HCL2 828 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 PPARGC1AQ9UBK2 798 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 TFR2Q9UP52 801 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ADH1CP00326 375 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 RBL1P28749 1068 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 OR1D2P34982 312 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 CLCN5P51795 746 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 RHOAP61586 193 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 NAA30Q147X3 362 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 MPP7Q5T2T1 576 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ZFP1Q6P2D0 407 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 UBE2E3Q969T4 207 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SKA1Q96BD8 255 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 MRPL57Q9BQC6 102 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ARHGEF4Q9NR80 690 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 GID8Q9NWU2 228 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 TAS2R14Q9NYV8 317 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 TCRBV9S1A1TA0A576 114 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ANGPT2O15123 496 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 NOL3O60936 208 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 INHAP05111 366 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 CYBAP13498 195 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 GOT1P17174 413 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 KLRC2P26717 231 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 HOXA11P31270 313 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 RPL3P39023 403 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SLC5A3P53794 718 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 UBE3AQ05086 875 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 OASLQ15646 514 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ADGRF1Q5T601 910 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 FAM46CQ5VWP2 391 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SH2D3CQ8N5H7 860 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 DBF4BQ8NFT6 615 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 PRICKLE1Q96MT3 831 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 NPY6RQ99463 290 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ATP13A1Q9HD20 1204 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ZDHHC4Q9NPG8 344 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 CHST7Q9NS84 486 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 LGALS13Q9UHV8 139 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 LNPEPQ9UIQ6 1025 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SCML2Q9UQR0 700 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 FAM237BA0A1B0GVD1 139 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SUPT3HO75486 399 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 LRIG2O94898 1065 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 MLYCDO95822 493 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ANXA11P50995 505 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 CDH4P55283 916 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 CDK18Q07002 472 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 BCL2L1Q07817 233 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 CLEC20AQ6ZU45 233 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 CFAP36Q96G28 342 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SEC16BQ96JE7 1060 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 EIF2AQ9BY44 585 aaKnown RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 FBXW11Q9UKB1 542 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 SLC22A2O15244 555 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 UPP2O95045 317 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ITGBL1O95965 494 aaPredicted RBP3.44□□□□□ -1.86
VPS13C-203ENST00000395896 GLUD1P00367 558 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 FGFR1P11362 822 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 CKBP12277 381 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 COPAP53621 1224 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ADCY1Q08828 1119 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 DMC1Q14565 340 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 ZBTB6Q15916 424 aa3.44□□□□□ -1.86
VPS13C-203ENST00000395896 LVRNQ6Q4G3 990 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms