RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 POMKQ9H5K3 350 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 EPS15L1Q9UBC2 864 aa13.97□□□□□ -0.17
VAPB-202ENST00000395802 AAR2Q9Y312 384 aaKnown RBP13.97□□□□□ -0.17
VAPB-202ENST00000395802 USP15Q9Y4E8 981 aaPredicted RBP13.97□□□□□ -0.17
VAPB-202ENST00000395802 SZT2Q5T011 3432 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 NUP205Q92621 2012 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 A0A0D9SEW6 157 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 PSMD3O43242 534 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 JCHAINP01591 159 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 FAM153BP0C7A2 387 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 IVDP26440 423 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 HSPA9P38646 679 aaKnown RBP13.96□□□□□ -0.17
VAPB-202ENST00000395802 LMAN1P49257 510 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 PLK1P53350 603 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 ITGA8P53708 1063 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 SULT2A1Q06520 285 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 SLC20A2Q08357 652 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 SMAD4Q13485 552 aaKnown RBP13.96□□□□□ -0.17
VAPB-202ENST00000395802 DHCR24Q15392 516 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 EML3Q32P44 896 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 FAM153CQ494X1 144 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 LY6G5CQ5SRR4 150 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 B4GALNT4Q76KP1 1039 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 ZNF567Q8N184 647 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 GLIS1Q8NBF1 620 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 BHMTQ93088 406 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 CDX2Q99626 313 aaPredicted RBP13.96□□□□□ -0.17
VAPB-202ENST00000395802 LINC00597Q9H2U6 94 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 RBM22Q9NW64 420 aaKnown RBP eCLIP13.96□□□□□ -0.17
VAPB-202ENST00000395802 FAM53CQ9NYF3 392 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 UBA2Q9UBT2 640 aaPredicted RBP13.96□□□□□ -0.17
VAPB-202ENST00000395802 FAM153AQ9UHL3 310 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 RSPH14Q9UHP6 348 aa13.96□□□□□ -0.17
VAPB-202ENST00000395802 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.95□□□□□ -0.18
VAPB-202ENST00000395802 AP3B1O00203 1094 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 CBX4O00257 560 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 HOXC11O43248 304 aaPredicted RBP13.95□□□□□ -0.18
VAPB-202ENST00000395802 ANXA9O76027 345 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 ADH5P11766 374 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 CES1P23141 567 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 ACVRL1P37023 503 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 MMP13P45452 471 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 TNK2Q07912 1038 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 ZNF235Q14590 738 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 LBRQ14739 615 aaKnown RBP13.95□□□□□ -0.18
VAPB-202ENST00000395802 SLMAPQ14BN4 828 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 INO80DQ53TQ3 878 aaPredicted RBP13.95□□□□□ -0.18
VAPB-202ENST00000395802 TANGO2Q6ICL3 276 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 HIBCHQ6NVY1 386 aaPredicted RBP13.95□□□□□ -0.18
VAPB-202ENST00000395802 RHBDF2Q6PJF5 856 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 POTEHQ6S545 545 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 ARHGAP36Q6ZRI8 547 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 PLCD3Q8N3E9 789 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 CPA6Q8N4T0 437 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 RIN3Q8TB24 985 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 FBXO25Q8TCJ0 367 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 LRRN4Q8WUT4 740 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 AGAP3Q96P47 875 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 MYADMQ96S97 322 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 FAM83CQ9BQN1 747 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 UBE2ZQ9H832 354 aaPredicted RBP13.95□□□□□ -0.18
VAPB-202ENST00000395802 EIF2B3Q9NR50 452 aaKnown RBP13.95□□□□□ -0.18
VAPB-202ENST00000395802 PLK2Q9NYY3 685 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 GRHL1Q9NZI5 618 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 SEPT3Q9UH03 358 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 FAM50BQ9Y247 325 aa13.95□□□□□ -0.18
VAPB-202ENST00000395802 TPSB2P20231 275 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 KCNA5P22460 613 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 FCARP24071 287 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 CSKP41240 450 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 TNNT3P45378 269 aaPredicted RBP13.94□□□□□ -0.18
VAPB-202ENST00000395802 SEMA5AQ13591 1074 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 TPSAB1Q15661 275 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 RNASEH2BQ5TBB1 312 aaKnown RBP13.94□□□□□ -0.18
VAPB-202ENST00000395802 TEX26Q8N6G2 289 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 OR7D4Q8NG98 312 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 HLA-CQ95604 372 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 NXPE3Q969Y0 559 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 TRMT61BQ9BVS5 477 aaKnown RBP13.94□□□□□ -0.18
VAPB-202ENST00000395802 PHACTR1Q9C0D0 580 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 POLR1EQ9GZS1 481 aaKnown RBP13.94□□□□□ -0.18
VAPB-202ENST00000395802 GBA3Q9H227 469 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 ZDHHC18Q9NUE0 388 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 CDH22Q9UJ99 828 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 FARP1Q9Y4F1 1045 aaPredicted RBP13.94□□□□□ -0.18
VAPB-202ENST00000395802 H3BQ06 376 aaPredicted RBP13.94□□□□□ -0.18
VAPB-202ENST00000395802 J3KR12 359 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 CACNG3O60359 315 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 APRTP07741 180 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 MAGEA6P43360 314 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 ZBTB17Q13105 803 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 PLEKHG6Q3KR16 790 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 FSCBQ5H9T9 825 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 VITQ6UXI7 678 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 NUDT18Q6ZVK8 323 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 PRUNE1Q86TP1 453 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 AHI1Q8N157 1196 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 ZCCHC9Q8N567 271 aaKnown RBP13.94□□□□□ -0.18
VAPB-202ENST00000395802 DEFB123Q8N688 67 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 MYLIPQ8WY64 445 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms