RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 PRR23BQ6ZRT6 265 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 CEP68Q76N32 757 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 KIAA1328Q86T90 577 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 KBTBD6Q86V97 674 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 ZNF354CQ86Y25 554 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 TP53INP2Q8IXH6 220 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 NPWQ8N729 165 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 KCTD6Q8NC69 237 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 RAPGEF5Q92565 580 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 NKD2Q969F2 451 aaPredicted RBP16.91■□□□□ 0.3
CXCL1-201ENST00000395761 SIPA1Q96FS4 1042 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 FAM129BQ96TA1 746 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 EPC1Q9H2F5 836 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 LRRC19Q9H756 370 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 MBD1Q9UIS9 605 aaPredicted RBP16.91■□□□□ 0.3
CXCL1-201ENST00000395761 CYP8B1Q9UNU6 501 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 ALG6Q9Y672 507 aa16.91■□□□□ 0.3
CXCL1-201ENST00000395761 EML5Q05BV3 1969 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 ZSCAN12O43309 604 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 ZNF821O75541 412 aaPredicted RBP16.9■□□□□ 0.3
CXCL1-201ENST00000395761 P2RY2P41231 377 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 SLC1A1P43005 524 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 SERPINH1P50454 418 aaKnown RBP16.9■□□□□ 0.3
CXCL1-201ENST00000395761 SLC20A2Q08357 652 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 KIF5AQ12840 1032 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 SERINC3Q13530 473 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 PARP15Q460N3 678 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 RETSATQ6NUM9 610 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 Q6ZVU0 165 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 ARHGAP12Q8IWW6 846 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 TPCN2Q8NHX9 752 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 KIAA1524Q8TCG1 905 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 PRCCQ92733 491 aaPredicted RBP16.9■□□□□ 0.3
CXCL1-201ENST00000395761 FAM122AQ96E09 287 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 CALR3Q96L12 384 aaKnown RBP16.9■□□□□ 0.3
CXCL1-201ENST00000395761 TSGA10Q9BZW7 698 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 RSPH9Q9H1X1 276 aaPredicted RBP16.9■□□□□ 0.3
CXCL1-201ENST00000395761 TRIM10Q9UDY6 481 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 HPCAL4Q9UM19 191 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 FCF1Q9Y324 198 aaKnown RBP16.9■□□□□ 0.3
CXCL1-201ENST00000395761 MYO15AQ9UKN7 3530 aa16.9■□□□□ 0.3
CXCL1-201ENST00000395761 SPOPO43791 374 aa16.89■□□□□ 0.29
CXCL1-201ENST00000395761 BNIP3LO60238 219 aa16.89■□□□□ 0.29
CXCL1-201ENST00000395761 C7P10643 843 aa16.89■□□□□ 0.29
CXCL1-201ENST00000395761 KDELR1P24390 212 aa16.89■□□□□ 0.29
CXCL1-201ENST00000395761 PAPOLAP51003 745 aaKnown RBP16.89■□□□□ 0.29
CXCL1-201ENST00000395761 TPMTP51580 245 aa16.89■□□□□ 0.29
CXCL1-201ENST00000395761 NDST2P52849 883 aa16.89■□□□□ 0.29
CXCL1-201ENST00000395761 ZFYVE27Q5T4F4 411 aa16.89■□□□□ 0.29
CXCL1-201ENST00000395761 ASCL5Q7RTU5 278 aa16.89■□□□□ 0.29
CXCL1-201ENST00000395761 METTL3Q86U44 580 aaKnown RBP16.89■□□□□ 0.29
CXCL1-201ENST00000395761 MMAAQ8IVH4 418 aaKnown RBP16.89■□□□□ 0.29
CXCL1-201ENST00000395761 REXO1L1PQ8IX06 675 aa16.89■□□□□ 0.29
CXCL1-201ENST00000395761 CALN1Q9BXU9 219 aa16.89■□□□□ 0.29
CXCL1-201ENST00000395761 TNKS2Q9H2K2 1166 aa16.89■□□□□ 0.29
CXCL1-201ENST00000395761 SEMA4AQ9H3S1 761 aa16.89■□□□□ 0.29
CXCL1-201ENST00000395761 ITM2CQ9NQX7 267 aa16.89■□□□□ 0.29
CXCL1-201ENST00000395761 DONSONQ9NYP3 566 aa16.89■□□□□ 0.29
CXCL1-201ENST00000395761 SMG5Q9UPR3 1016 aaKnown RBP16.89■□□□□ 0.29
CXCL1-201ENST00000395761 ZKSCAN5Q9Y2L8 839 aa16.89■□□□□ 0.29
CXCL1-201ENST00000395761 CHD5Q8TDI0 1954 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 IGHV1OR15-9A0A0B4J2B8 117 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 LRRD1A4D1F6 860 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 C3orf70A6NLC5 250 aaPredicted RBP16.88■□□□□ 0.29
CXCL1-201ENST00000395761 J3KR12 359 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 DFFAO00273 331 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 KRT86O43790 486 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 LMNAP02545 664 aaKnown RBP16.88■□□□□ 0.29
CXCL1-201ENST00000395761 PLA2G5P39877 138 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 CLCN6P51797 869 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 NAP1L1P55209 391 aaKnown RBP16.88■□□□□ 0.29
CXCL1-201ENST00000395761 PDK2Q15119 407 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 PLK5Q496M5 336 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 ANKRD20A8PQ5CZ79 823 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 LRRC38Q5VT99 294 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 ZNF776Q68DI1 518 aaPredicted RBP16.88■□□□□ 0.29
CXCL1-201ENST00000395761 C11orf63Q6NUN7 778 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 C22orf39Q6P5X5 142 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 ARHGAP36Q6ZRI8 547 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 RHOT1Q8IXI2 618 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 RNF10Q8N5U6 811 aaKnown RBP16.88■□□□□ 0.29
CXCL1-201ENST00000395761 OR2A12Q8NGT7 310 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 PCDH19Q8TAB3 1148 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 DUSP15Q9H1R2 295 aaPredicted RBP16.88■□□□□ 0.29
CXCL1-201ENST00000395761 FBRSQ9HAH7 460 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.88■□□□□ 0.29
CXCL1-201ENST00000395761 USP36Q9P275 1121 aaKnown RBP16.88■□□□□ 0.29
CXCL1-201ENST00000395761 RCOR3Q9P2K3 495 aaPredicted RBP16.88■□□□□ 0.29
CXCL1-201ENST00000395761 SARDHQ9UL12 918 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 ZFHX2Q9C0A1 2572 aaPredicted RBP16.88■□□□□ 0.29
CXCL1-201ENST00000395761 VPS13AQ96RL7 3174 aa16.88■□□□□ 0.29
CXCL1-201ENST00000395761 PRR23AA6NEV1 266 aa16.87■□□□□ 0.29
CXCL1-201ENST00000395761 ARHGAP42A6NI28 874 aa16.87■□□□□ 0.29
CXCL1-201ENST00000395761 MCF2LO15068 1137 aa16.87■□□□□ 0.29
CXCL1-201ENST00000395761 ZNF217O75362 1048 aa16.87■□□□□ 0.29
CXCL1-201ENST00000395761 ACADMP11310 421 aa16.87■□□□□ 0.29
CXCL1-201ENST00000395761 DNA2P51530 1060 aa16.87■□□□□ 0.29
CXCL1-201ENST00000395761 METAP1P53582 386 aa16.87■□□□□ 0.29
CXCL1-201ENST00000395761 BYSLQ13895 437 aaKnown RBP16.87■□□□□ 0.29
CXCL1-201ENST00000395761 ELAVL3Q14576 367 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms