RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 MED15Q96RN5 788 aa6.37□□□□□ -1.39
PTPN20-208ENST00000395727 DPH2Q9BQC3 489 aaPredicted RBP6.37□□□□□ -1.39
PTPN20-208ENST00000395727 TPSD1Q9BZJ3 242 aa6.37□□□□□ -1.39
PTPN20-208ENST00000395727 INTS2Q9H0H0 1204 aaKnown RBP6.37□□□□□ -1.39
PTPN20-208ENST00000395727 ACBD3Q9H3P7 528 aa6.37□□□□□ -1.39
PTPN20-208ENST00000395727 CLSTN2Q9H4D0 955 aa6.37□□□□□ -1.39
PTPN20-208ENST00000395727 THAP9Q9H5L6 903 aa6.37□□□□□ -1.39
PTPN20-208ENST00000395727 TMEM51Q9NW97 253 aa6.37□□□□□ -1.39
PTPN20-208ENST00000395727 APEX2Q9UBZ4 518 aa6.37□□□□□ -1.39
PTPN20-208ENST00000395727 NUDT5Q9UKK9 219 aa6.37□□□□□ -1.39
PTPN20-208ENST00000395727 IGHV1OR15-9A0A0B4J2B8 117 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 SLC12A8A0AV02 714 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 LNP1A1A4G5 178 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 KIAA1324LA8MWY0 1029 aaPredicted RBP6.36□□□□□ -1.39
PTPN20-208ENST00000395727 UPK3BL1B0FP48 263 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 UPK3BL2E5RIL1 263 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 BIN1O00499 593 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 DCLK1O15075 740 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 IGLV3-25P01717 112 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 FYNP06241 537 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 GLI1P08151 1106 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 BCKDHBP21953 392 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 ERCC5P28715 1186 aaPredicted RBP6.36□□□□□ -1.39
PTPN20-208ENST00000395727 GBP1P32455 592 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 STX17P56962 302 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 CREB5Q02930 508 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 CLCQ05315 142 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 LMAN2Q12907 356 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 EIF4EBP2Q13542 120 aaPredicted RBP6.36□□□□□ -1.39
PTPN20-208ENST00000395727 STARD3Q14849 445 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 SF3A2Q15428 464 aaKnown RBP6.36□□□□□ -1.39
PTPN20-208ENST00000395727 EXOC3L4Q17RC7 722 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 MSMPQ1L6U9 139 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 FAM133BQ5BKY9 247 aaKnown RBP6.36□□□□□ -1.39
PTPN20-208ENST00000395727 STPG1Q5TH74 334 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 ISM2Q6H9L7 571 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 LETMD1Q6P1Q0 360 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 SLC23A3Q6PIS1 610 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 GBP6Q6ZN66 633 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 RRAGAQ7L523 313 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 TMEM110Q86TL2 294 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 SYT12Q8IV01 421 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 DENND1CQ8IV53 801 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 FAM114A1Q8IWE2 563 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 CEP76Q8TAP6 659 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 UBA3Q8TBC4 463 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 HMGB4Q8WW32 186 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 ZNF606Q8WXB4 792 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 GOLGA1Q92805 767 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 MRGPRX1Q96LB2 322 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 ACOX2Q99424 681 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 MIPEPQ99797 713 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 EDEM2Q9BV94 578 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 LSM14BQ9BX40 385 aaKnown RBP6.36□□□□□ -1.39
PTPN20-208ENST00000395727 PCED1AQ9H1Q7 454 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 ASNSD1Q9NWL6 643 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 ELOVL2Q9NXB9 296 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 CALCOCO1Q9P1Z2 691 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 USP36Q9P275 1121 aaKnown RBP6.36□□□□□ -1.39
PTPN20-208ENST00000395727 BCCIPQ9P287 314 aaKnown RBP eCLIP6.36□□□□□ -1.39
PTPN20-208ENST00000395727 MBD1Q9UIS9 605 aaPredicted RBP6.36□□□□□ -1.39
PTPN20-208ENST00000395727 PILRBQ9UKJ0 227 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 DAAM1Q9Y4D1 1078 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 STON1Q9Y6Q2 735 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 U3KQE9 123 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 CKAP5Q14008 2032 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 DCHS1Q96JQ0 3298 aa6.36□□□□□ -1.39
PTPN20-208ENST00000395727 PCDH15Q96QU1 1955 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 DNAH14Q0VDD8 3507 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 SLC22A31A6NKX4 558 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 BECN2A8MW95 431 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 PAPSS1O43252 624 aaPredicted RBP6.35□□□□□ -1.39
PTPN20-208ENST00000395727 ACSL4O60488 711 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 NCAM1P13591 858 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 LCP1P13796 627 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 CSRP1P21291 193 aaKnown RBP6.35□□□□□ -1.39
PTPN20-208ENST00000395727 PON1P27169 355 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 HLA-FP30511 346 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 CDH5P33151 784 aaPredicted RBP6.35□□□□□ -1.39
PTPN20-208ENST00000395727 IL12RB1P42701 662 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 SLC11A2P49281 568 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 COPAP53621 1224 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 SHC2P98077 582 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 ZBTB16Q05516 673 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 ZNF234Q14588 700 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 MAN2A1Q16706 1144 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 GEN1Q17RS7 908 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 FUT11Q495W5 492 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 PIK3R6Q5UE93 754 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 LYSMD4Q5XG99 296 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 TMEM215Q68D42 235 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 IL31Q6EBC2 164 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 KIAA1211LQ6NV74 962 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 GK5Q6ZS86 529 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 RBM43Q6ZSC3 357 aaKnown RBP6.35□□□□□ -1.39
PTPN20-208ENST00000395727 AHI1Q8N157 1196 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 FAM13CQ8NE31 585 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 ZNF397Q8NF99 534 aaPredicted RBP6.35□□□□□ -1.39
PTPN20-208ENST00000395727 CADM4Q8NFZ8 388 aa6.35□□□□□ -1.39
PTPN20-208ENST00000395727 DNAJB8Q8NHS0 232 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms