RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ZBTB11O95625 1053 aaPredicted RBP13.44□□□□□ -0.26
NFKB1-202ENST00000394820 HSPA8P11142 646 aaKnown RBP13.44□□□□□ -0.26
NFKB1-202ENST00000394820 CYP2C9P11712 490 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 ZNF23P17027 643 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 MAGP20916 626 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 GRK2P25098 689 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 SLC25A11Q02978 314 aaKnown RBP13.44□□□□□ -0.26
NFKB1-202ENST00000394820 PPP1R8Q12972 351 aaKnown RBP13.44□□□□□ -0.26
NFKB1-202ENST00000394820 URGCPQ8TCY9 931 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 FAM8A1Q9UBU6 413 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 CRYL1Q9Y2S2 319 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 A0A088AWK7 358 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 FAM189A1O60320 539 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 ITGBL1O95965 494 aaPredicted RBP13.44□□□□□ -0.26
NFKB1-202ENST00000394820 PIRTP0C851 137 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 CES1P23141 567 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 GPD2P43304 727 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 GSSP48637 474 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 ZNF618Q5T7W0 954 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 FAM219BQ5XKK7 198 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 DNAJC14Q6Y2X3 702 aaPredicted RBP13.44□□□□□ -0.26
NFKB1-202ENST00000394820 TRIM74Q86UV6 250 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 TRIM73Q86UV7 250 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 CAND1Q86VP6 1230 aaKnown RBP13.44□□□□□ -0.26
NFKB1-202ENST00000394820 CLEC4FQ8N1N0 589 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 TMEM174Q8WUU8 243 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 GCOM2Q9BZD3 368 aaPredicted RBP13.44□□□□□ -0.26
NFKB1-202ENST00000394820 POPDC2Q9HBU9 364 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.44□□□□□ -0.26
NFKB1-202ENST00000394820 C3orf70A6NLC5 250 aaPredicted RBP13.44□□□□□ -0.26
NFKB1-202ENST00000394820 GAS2O43903 313 aaKnown RBP13.44□□□□□ -0.26
NFKB1-202ENST00000394820 BNIP3LO60238 219 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 E2F6O75461 281 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 TNFAIP8O95379 198 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 UGT1A6P19224 532 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 ITGAXP20702 1163 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 CYP2B6P20813 491 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 PTPN7P35236 360 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 ARHGAP1Q07960 439 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 WASHC5Q12768 1159 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 CTC1Q2NKJ3 1217 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 PERM1Q5SV97 790 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 SKA2Q8WVK7 121 aaPredicted RBP13.44□□□□□ -0.26
NFKB1-202ENST00000394820 DGCR14Q96DF8 476 aaKnown RBP13.44□□□□□ -0.26
NFKB1-202ENST00000394820 DNAI2Q9GZS0 605 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 MROH8Q9H579 483 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 XPR1Q9UBH6 696 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 COMMD3-BMI1R4GMX3 469 aa13.44□□□□□ -0.26
NFKB1-202ENST00000394820 ERI2A8K979 691 aaKnown RBP13.43□□□□□ -0.26
NFKB1-202ENST00000394820 PTGES3LE9PB15 166 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 ANGPT2O15123 496 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 ADCY6O43306 1168 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 MFSD11O43934 449 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 CRTAMO95727 393 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 LMO2P25791 158 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 SERPINB8P50452 374 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 TRAF2Q12933 501 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 GSTA3Q16772 222 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 LSM12Q3MHD2 195 aaKnown RBP13.43□□□□□ -0.26
NFKB1-202ENST00000394820 TBCELQ5QJ74 424 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 TEDDM1Q5T9Z0 273 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 GPR141Q7Z602 305 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 DNAJB14Q8TBM8 379 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 NCLNQ969V3 563 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 TUBGCP3Q96CW5 907 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 HBEGFQ99075 208 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 WDR83Q9BRX9 315 aaKnown RBP13.43□□□□□ -0.26
NFKB1-202ENST00000394820 PLEKHA5Q9HAU0 1116 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 FARP1Q9Y4F1 1045 aaPredicted RBP13.43□□□□□ -0.26
NFKB1-202ENST00000394820 KNL1Q8NG31 2342 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 LINC00854A0A1B0GVQ3 168 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 RECQL4O94761 1208 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 TMCC1O94876 653 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 CYP3A5P20815 502 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 NAA20P61599 178 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 TSPY1Q01534 308 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 CAPRIN1Q14444 709 aaKnown RBP13.43□□□□□ -0.26
NFKB1-202ENST00000394820 TLR1Q15399 786 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 SGO1Q5FBB7 561 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 ZNF484Q5JVG2 852 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 ZNF470Q6ECI4 717 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 CCDC81Q6ZN84 652 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 RMND5BQ96G75 393 aaPredicted RBP13.43□□□□□ -0.26
NFKB1-202ENST00000394820 C7orf26Q96N11 449 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 CCDC68Q9H2F9 335 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 SOX17Q9H6I2 414 aaPredicted RBP13.43□□□□□ -0.26
NFKB1-202ENST00000394820 RRN3Q9NYV6 651 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 ATXN10Q9UBB4 475 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 GIMAP2Q9UG22 337 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 ACOT9Q9Y305 439 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 ABLIM1O14639 778 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 RGS2P41220 211 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 NDUFV1P49821 464 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 PDK2Q15119 407 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 CLEC6AQ6EIG7 209 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 KLHDC10Q6PID8 442 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 KYAT3Q6YP21 454 aaKnown RBP13.43□□□□□ -0.26
NFKB1-202ENST00000394820 ANKRD23Q86SG2 305 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 BEST2Q8NFU1 509 aa13.43□□□□□ -0.26
NFKB1-202ENST00000394820 OR9I1Q8NGQ6 314 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms