RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 CPSF7Q8N684 471 aaKnown RBP19.18■□□□□ 0.66
HOXC6-202ENST00000394331 TRPM4Q8TD43 1214 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 FNIP1Q8TF40 1166 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 ASB9Q96DX5 294 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 CARD8Q9Y2G2 431 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 LCTP09848 1927 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 IGKV6-21A0A0C4DH24 114 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 J3QRK9 145 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 NOP56O00567 594 aaKnown RBP19.18■□□□□ 0.66
HOXC6-202ENST00000394331 RGS13O14921 159 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 AKAP10O43572 662 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 RPL10AP62906 217 aaKnown RBP19.18■□□□□ 0.66
HOXC6-202ENST00000394331 ITGADQ13349 1161 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 SCARA5Q6ZMJ2 495 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 CPNE9Q8IYJ1 553 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 FBXL8Q96CD0 374 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 ZNF347Q96SE7 839 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 PLAC1Q9HBJ0 212 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 SMYD2Q9NRG4 433 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 HACD3Q9P035 362 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 ANKMY1Q9P2S6 941 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 SUCOQ9UBS9 1254 aaKnown RBP19.18■□□□□ 0.66
HOXC6-202ENST00000394331 ACKR2O00590 384 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 PARNO95453 639 aaKnown RBP19.18■□□□□ 0.66
HOXC6-202ENST00000394331 CSH1P0DML2 217 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 CSH2P0DML3 217 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 CD19P15391 556 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 PSMC1P62191 440 aaKnown RBP19.18■□□□□ 0.66
HOXC6-202ENST00000394331 INSCQ1MX18 579 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 TREML2Q5T2D2 321 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 FAM117BQ6P1L5 589 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 SAPCD2Q86UD0 394 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 MYO1HQ8N1T3 1032 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 ANKFN1Q8N957 763 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 SPATC1LQ9H0A9 340 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 PCDHB12Q9Y5F1 795 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 LOC285556D6RIA3 1793 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 ANKRD34BA5PLL1 514 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 CLPXO76031 633 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 HOXD11P31277 338 aaPredicted RBP19.17■□□□□ 0.66
HOXC6-202ENST00000394331 RFC1P35251 1148 aaPredicted RBP19.17■□□□□ 0.66
HOXC6-202ENST00000394331 MTM1Q13496 603 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 LY6KQ17RY6 165 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 GPR107Q5VW38 600 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 DENND1BQ6P3S1 775 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 TTC33Q6PID6 262 aaPredicted RBP19.17■□□□□ 0.66
HOXC6-202ENST00000394331 SNX32Q86XE0 403 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 ACSF2Q96CM8 615 aaPredicted RBP19.17■□□□□ 0.66
HOXC6-202ENST00000394331 OSBPL10Q9BXB5 764 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 DCDC2Q9UHG0 476 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 DAPK2Q9UIK4 370 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 TRIM38O00635 465 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 CCNA2P20248 432 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 PMS2P3Q13401 168 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 PRKG1Q13976 671 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 Q3C1V9 767 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 FAM47CQ5HY64 1035 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 VWA5B1Q5TIE3 1220 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 ATF7IP2Q5U623 682 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 PLPPR4Q7Z2D5 763 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 MMAAQ8IVH4 418 aaKnown RBP19.17■□□□□ 0.66
HOXC6-202ENST00000394331 LRRC71Q8N4P6 559 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 COG4Q9H9E3 785 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 PTPRHQ9HD43 1115 aa19.17■□□□□ 0.66
HOXC6-202ENST00000394331 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.17■□□□□ 0.66
HOXC6-202ENST00000394331 NXF1Q9UBU9 619 aaKnown RBP19.17■□□□□ 0.66
HOXC6-202ENST00000394331 CST8O60676 142 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 ZBTB7AO95365 584 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 P4HA1P13674 534 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 MAGEA6P43360 314 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 TRPC1P48995 793 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 RHDQ02161 417 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 DGKDQ16760 1214 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 PTPN20Q4JDL3 420 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 ATG14Q6ZNE5 492 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 LINC00299Q6ZSB3 139 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 CYS1Q717R9 158 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 GPR20Q99678 358 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 WDR41Q9HAD4 459 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 MOV10Q9HCE1 1003 aaKnown RBP19.16■□□□□ 0.66
HOXC6-202ENST00000394331 PACSIN3Q9UKS6 424 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 APOC4-APOC2K7ER74 178 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 PLOD2O00469 737 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 USP2O75604 605 aaPredicted RBP19.16■□□□□ 0.66
HOXC6-202ENST00000394331 IL18RAPO95256 599 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 APOC2P02655 101 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 NELFEP18615 380 aaKnown RBP19.16■□□□□ 0.66
HOXC6-202ENST00000394331 SLC25A11Q02978 314 aaKnown RBP19.16■□□□□ 0.66
HOXC6-202ENST00000394331 SPCS2Q15005 226 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 N4BP2L1Q5TBK1 243 aaPredicted RBP19.16■□□□□ 0.66
HOXC6-202ENST00000394331 FAM71DQ8N9W8 422 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 FZD8Q9H461 694 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 QPCTLQ9NXS2 382 aa19.16■□□□□ 0.66
HOXC6-202ENST00000394331 SSC5DA1L4H1 1573 aa19.15■□□□□ 0.66
HOXC6-202ENST00000394331 ZNF839A8K0R7 811 aa19.15■□□□□ 0.66
HOXC6-202ENST00000394331 HK2P52789 917 aa19.15■□□□□ 0.66
HOXC6-202ENST00000394331 ZNF846Q147U1 533 aa19.15■□□□□ 0.66
HOXC6-202ENST00000394331 ZNF667Q5HYK9 610 aa19.15■□□□□ 0.66
HOXC6-202ENST00000394331 TMEM26Q6ZUK4 368 aa19.15■□□□□ 0.66
HOXC6-202ENST00000394331 SDR16C5Q8N3Y7 309 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms