RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 USP39Q53GS9 565 aaKnown RBP16.55■□□□□ 0.24
TGFA-202ENST00000394241 PITRM1Q5JRX3 1037 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 LRRC38Q5VT99 294 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 MBLAC2Q68D91 279 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 RFX8Q6ZV50 586 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 TRMT11Q7Z4G4 463 aaKnown RBP16.55■□□□□ 0.24
TGFA-202ENST00000394241 NLRP14Q86W24 1093 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 RHOT1Q8IXI2 618 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 ZNF513Q8N8E2 541 aaPredicted RBP16.55■□□□□ 0.24
TGFA-202ENST00000394241 RTL3Q8N8U3 475 aaKnown RBP16.55■□□□□ 0.24
TGFA-202ENST00000394241 KCNV2Q8TDN2 545 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 MUC3BQ9H195 1237 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 KCNF1Q9H3M0 494 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 GOLPH3Q9H4A6 298 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 PCDH18Q9HCL0 1135 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 ELOVL2Q9NXB9 296 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 DONSONQ9NYP3 566 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 ZNF212Q9UDV6 495 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 STARD13Q9Y3M8 1113 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 HYOU1Q9Y4L1 999 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 ALG6Q9Y672 507 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 SMG1Q96Q15 3661 aaKnown RBP16.55■□□□□ 0.24
TGFA-202ENST00000394241 IGSF10Q6WRI0 2623 aa16.55■□□□□ 0.24
TGFA-202ENST00000394241 SPAARA0A1B0GVQ0 90 aa16.54■□□□□ 0.24
TGFA-202ENST00000394241 PSTPIP1O43586 416 aa16.54■□□□□ 0.24
TGFA-202ENST00000394241 TIMM44O43615 452 aa16.54■□□□□ 0.24
TGFA-202ENST00000394241 ZIC2O95409 532 aaPredicted RBP16.54■□□□□ 0.24
TGFA-202ENST00000394241 POLR2EP19388 210 aaKnown RBP16.54■□□□□ 0.24
TGFA-202ENST00000394241 TIE1P35590 1138 aa16.54■□□□□ 0.24
TGFA-202ENST00000394241 KIR2DL1P43626 348 aaPredicted RBP16.54■□□□□ 0.24
TGFA-202ENST00000394241 HSF5Q4G112 596 aaPredicted RBP16.54■□□□□ 0.24
TGFA-202ENST00000394241 C2orf27AQ580R0 203 aa16.54■□□□□ 0.24
TGFA-202ENST00000394241 RNF219Q5W0B1 726 aaPredicted RBP16.54■□□□□ 0.24
TGFA-202ENST00000394241 EGFLAMQ63HQ2 1017 aa16.54■□□□□ 0.24
TGFA-202ENST00000394241 TMEM215Q68D42 235 aa16.54■□□□□ 0.24
TGFA-202ENST00000394241 ZNF783Q6ZMS7 281 aa16.54■□□□□ 0.24
TGFA-202ENST00000394241 ADIPOR2Q86V24 386 aa16.54■□□□□ 0.24
TGFA-202ENST00000394241 MAP7D3Q8IWC1 876 aa16.54■□□□□ 0.24
TGFA-202ENST00000394241 USP33Q8TEY7 942 aa16.54■□□□□ 0.24
TGFA-202ENST00000394241 KLHL11Q9NVR0 708 aa16.54■□□□□ 0.24
TGFA-202ENST00000394241 RCOR3Q9P2K3 495 aaPredicted RBP16.54■□□□□ 0.24
TGFA-202ENST00000394241 EVLQ9UI08 416 aaPredicted RBP16.54■□□□□ 0.24
TGFA-202ENST00000394241 LAMA5O15230 3695 aa16.54■□□□□ 0.24
TGFA-202ENST00000394241 MUC22E2RYF6 1773 aaPredicted RBP16.54■□□□□ 0.24
TGFA-202ENST00000394241 ILVBLA1L0T0 632 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 GRID2IPA4D2P6 1211 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 FAM221BA6H8Z2 402 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 WASH4PA8MWX3 477 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 NPC1O15118 1278 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 TRIM16O95361 564 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 ASLP04424 464 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 CAPNS1P04632 268 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 ATP5BP06576 529 aaKnown RBP16.53■□□□□ 0.24
TGFA-202ENST00000394241 TNNT1P13805 278 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 MZF1P28698 734 aaPredicted RBP16.53■□□□□ 0.24
TGFA-202ENST00000394241 ETFBP38117 255 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 HCAR3P49019 387 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 DHPSP49366 369 aaPredicted RBP16.53■□□□□ 0.24
TGFA-202ENST00000394241 PDK2Q15119 407 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 ODF2Q5BJF6 829 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 ZNF662Q6ZS27 426 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 SYCE1Q8N0S2 351 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 RNF10Q8N5U6 811 aaKnown RBP16.53■□□□□ 0.24
TGFA-202ENST00000394241 KCTD6Q8NC69 237 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 TSTD1Q8NFU3 115 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 OR52K2Q8NGK3 314 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 PIGKQ92643 395 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 ZNF830Q96NB3 372 aaPredicted RBP16.53■□□□□ 0.24
TGFA-202ENST00000394241 CSPG4P5Q96PW8 444 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 ZNF670Q9BS34 389 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 TPSD1Q9BZJ3 242 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 DDX56Q9NY93 547 aaKnown RBP16.53■□□□□ 0.24
TGFA-202ENST00000394241 CWC15Q9P013 229 aaKnown RBP16.53■□□□□ 0.24
TGFA-202ENST00000394241 DNAI1Q9UI46 699 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 VPS28Q9UK41 221 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 INTS6Q9UL03 887 aaKnown RBP16.53■□□□□ 0.24
TGFA-202ENST00000394241 GUCA1BQ9UMX6 200 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 PPP2R2CQ9Y2T4 447 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 GON4LQ3T8J9 2241 aa16.53■□□□□ 0.24
TGFA-202ENST00000394241 RAMP2O60895 175 aa16.52■□□□□ 0.24
TGFA-202ENST00000394241 KLF8O95600 359 aaPredicted RBP16.52■□□□□ 0.24
TGFA-202ENST00000394241 KRT1P04264 644 aa16.52■□□□□ 0.24
TGFA-202ENST00000394241 DLDP09622 509 aaKnown RBP16.52■□□□□ 0.24
TGFA-202ENST00000394241 CHRM1P11229 460 aaPredicted RBP16.52■□□□□ 0.24
TGFA-202ENST00000394241 HNRNPLP14866 589 aaKnown RBP eCLIP16.52■□□□□ 0.241e-8■■■■■ 28.1
TGFA-202ENST00000394241 BCKDHBP21953 392 aa16.52■□□□□ 0.24
TGFA-202ENST00000394241 MAPK8P45983 427 aa16.52■□□□□ 0.24
TGFA-202ENST00000394241 PLK1P53350 603 aa16.52■□□□□ 0.24
TGFA-202ENST00000394241 GNA12Q03113 381 aa16.52■□□□□ 0.24
TGFA-202ENST00000394241 SULT2A1Q06520 285 aa16.52■□□□□ 0.24
TGFA-202ENST00000394241 DPYSQ14117 519 aa16.52■□□□□ 0.24
TGFA-202ENST00000394241 DPYSL3Q14195 570 aa16.52■□□□□ 0.24
TGFA-202ENST00000394241 COL28A1Q2UY09 1125 aa16.52■□□□□ 0.24
TGFA-202ENST00000394241 ATP13A4Q4VNC1 1196 aa16.52■□□□□ 0.24
TGFA-202ENST00000394241 TRIM61Q5EBN2 209 aa16.52■□□□□ 0.24
TGFA-202ENST00000394241 EMC10Q5UCC4 262 aa16.52■□□□□ 0.24
TGFA-202ENST00000394241 CHPFQ8IZ52 775 aa16.52■□□□□ 0.24
TGFA-202ENST00000394241 APCDD1Q8J025 514 aa16.52■□□□□ 0.24
TGFA-202ENST00000394241 ALLCQ8N6M5 410 aa16.52■□□□□ 0.24
TGFA-202ENST00000394241 LRRC57Q8N9N7 239 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms