RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 WDR36Q8NI36 951 aaKnown RBP13.31□□□□□ -0.28
LCA5-202ENST00000392959 STN1Q9H668 368 aaKnown RBP13.31□□□□□ -0.28
LCA5-202ENST00000392959 FBXO6Q9NRD1 293 aaPredicted RBP13.31□□□□□ -0.28
LCA5-202ENST00000392959 VPS45Q9NRW7 570 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 OPTCQ9UBM4 332 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 PLA2G4CQ9UP65 541 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 SNX8Q9Y5X2 465 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 TSC22D2O75157 780 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 RECQL4O94761 1208 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 CELF2O95319 508 aaKnown RBP13.31□□□□□ -0.28
LCA5-202ENST00000392959 ALDH2P05091 517 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 PABPC1P11940 636 aaKnown RBP13.31□□□□□ -0.28
LCA5-202ENST00000392959 YWHAQP27348 245 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 RXRGP48443 463 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 TAS2R40P59535 323 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 CCDC149Q6ZUS6 474 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 KBTBD2Q8IY47 623 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 PTCD3Q96EY7 689 aaKnown RBP13.31□□□□□ -0.28
LCA5-202ENST00000392959 WDR18Q9BV38 432 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 PHACTR1Q9C0D0 580 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 POLR1EQ9GZS1 481 aaKnown RBP13.31□□□□□ -0.28
LCA5-202ENST00000392959 RGL2O15211 777 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 BIRC5O15392 142 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 GRIA4P48058 902 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 RAB27AP51159 221 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 ACSM2AQ08AH3 577 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 QPCTQ16769 361 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 DACT2Q5SW24 774 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 ACSM2BQ68CK6 577 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 RP9Q8TA86 221 aaKnown RBP13.31□□□□□ -0.28
LCA5-202ENST00000392959 TEKT5Q96M29 485 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 DEPDC7Q96QD5 511 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 C1orf50Q9BV19 199 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 RAP2CQ9Y3L5 183 aa13.31□□□□□ -0.28
LCA5-202ENST00000392959 TNPO3Q9Y5L0 923 aaKnown RBP13.31□□□□□ -0.28
LCA5-202ENST00000392959 TCRBV9S1A1TA0A576 114 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 AHCYL1O43865 530 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 URODP06132 367 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 ITGA2BP08514 1039 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 CLTBP09497 229 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 FLT3P36888 993 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 FCGRTP55899 365 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 ROR2Q01974 943 aaKnown RBP13.3□□□□□ -0.28
LCA5-202ENST00000392959 FAM183BPQ6ZVS7 135 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 ULK2Q8IYT8 1036 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 FBXO30Q8TB52 745 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 MARK4Q96L34 752 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 PANX3Q96QZ0 392 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 REEP1Q9H902 201 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 MAN1C1Q9NR34 630 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 A0A1W2PPM1 405 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 CENPXA8MT69 81 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 TRIM38O00635 465 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 WNT7AO00755 349 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 VCLP18206 1134 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 CYP2C18P33260 490 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 GPR15P49685 360 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 PHACTR4Q8IZ21 702 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 PIK3R5Q8WYR1 880 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 MED8Q96G25 268 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 MRPL48Q96GC5 212 aaKnown RBP13.3□□□□□ -0.28
LCA5-202ENST00000392959 ZNF670Q9BS34 389 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 SPAG4Q9NPE6 437 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 UBA2Q9UBT2 640 aaPredicted RBP13.3□□□□□ -0.28
LCA5-202ENST00000392959 COMMD3-BMI1R4GMX3 469 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 NBNO60934 754 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 SPATA31C1P0DKV0 1188 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 BDNFP23560 247 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 UBAP2LQ14157 1087 aaKnown RBP13.3□□□□□ -0.28
LCA5-202ENST00000392959 SQLEQ14534 574 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 FAM187BQ17R55 369 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 ZNF605Q86T29 641 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 PTGR2Q8N8N7 351 aaPredicted RBP13.3□□□□□ -0.28
LCA5-202ENST00000392959 SENP8Q96LD8 212 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 PGLYRP2Q96PD5 576 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 SERHL2Q9H4I8 314 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 SERHLQ9NQF3 203 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 KANSL3Q9P2N6 904 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 CDH9Q9ULB4 789 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 CORO1CQ9ULV4 474 aaPredicted RBP13.3□□□□□ -0.28
LCA5-202ENST00000392959 PPP2R3BQ9Y5P8 575 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 MRPL42Q9Y6G3 142 aaKnown RBP13.3□□□□□ -0.28
LCA5-202ENST00000392959 ITSN1Q15811 1721 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 WNT10BO00744 389 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 PEX11AO75192 247 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 NFKB1P19838 968 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 EPHB3P54753 998 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 ITGADQ13349 1161 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 TIMM50Q3ZCQ8 353 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 FGD3Q5JSP0 725 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 ZNF618Q5T7W0 954 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 EPHX4Q8IUS5 362 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 LGI2Q8N0V4 545 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 RASGEF1CQ8N431 466 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 PCSK9Q8NBP7 692 aaKnown RBP13.3□□□□□ -0.28
LCA5-202ENST00000392959 HDHD2Q9H0R4 259 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 MCM8Q9UJA3 840 aa13.3□□□□□ -0.28
LCA5-202ENST00000392959 WTIPA6NIX2 430 aaPredicted RBP13.29□□□□□ -0.28
LCA5-202ENST00000392959 TFEBP19484 476 aa13.29□□□□□ -0.28
LCA5-202ENST00000392959 UBA1P22314 1058 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms