RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 TIGD7Q6NT04 549 aaPredicted RBP26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 PTCD3Q96EY7 689 aaKnown RBP26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 CAPNS2Q96L46 248 aa26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 MCMBPQ9BTE3 642 aa26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 FICDQ9BVA6 458 aa26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 RBM22Q9NW64 420 aaKnown RBP eCLIP26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 WASH4PA8MWX3 477 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 GOLGA8TH3BQL2 631 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 ARVCFO00192 962 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 TRPA1O75762 1119 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 COL6A1P12109 1028 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 SELPP16109 830 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 CSE1LP55060 971 aaKnown RBP26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 CDK18Q07002 472 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 MRPL58Q14197 206 aaKnown RBP26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 DENND5AQ6IQ26 1287 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 ABI1Q8IZP0 508 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 GPR62Q9BZJ7 368 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 NOL6Q9H6R4 1146 aaKnown RBP26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 CAB39LQ9H9S4 337 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 IL37Q9NZH6 218 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 ITM2AO43736 263 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 LYPLA1O75608 230 aaPredicted RBP26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 SOAT2O75908 522 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 SLC2A3P11169 496 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 SLC8A1P32418 973 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 GATMP50440 423 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 GEMP55040 296 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 AQP5P55064 265 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 LONP2Q86WA8 852 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 C10orf107Q8IVU9 208 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 PLD6Q8N2A8 252 aaKnown RBP26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 TUBB6Q9BUF5 446 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 NMUR2Q9GZQ4 415 aa26.04■■□□□ 1.76
SMARCD3-203ENST00000392811 ENPP3O14638 875 aa26.03■■□□□ 1.76
SMARCD3-203ENST00000392811 TIMM44O43615 452 aa26.03■■□□□ 1.76
SMARCD3-203ENST00000392811 NBNO60934 754 aa26.03■■□□□ 1.76
SMARCD3-203ENST00000392811 ARPP19P56211 112 aa26.03■■□□□ 1.76
SMARCD3-203ENST00000392811 EFEMP1Q12805 493 aa26.03■■□□□ 1.76
SMARCD3-203ENST00000392811 PCID2Q5JVF3 399 aa26.03■■□□□ 1.76
SMARCD3-203ENST00000392811 PDPK2PQ6A1A2 396 aa26.03■■□□□ 1.76
SMARCD3-203ENST00000392811 PKN3Q6P5Z2 889 aa26.03■■□□□ 1.76
SMARCD3-203ENST00000392811 ZNF683Q8IZ20 524 aa26.03■■□□□ 1.76
SMARCD3-203ENST00000392811 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.03■■□□□ 1.76
SMARCD3-203ENST00000392811 NSL1Q96IY1 281 aa26.03■■□□□ 1.76
SMARCD3-203ENST00000392811 WWP1Q9H0M0 922 aa26.03■■□□□ 1.76
SMARCD3-203ENST00000392811 COPG2Q9UBF2 871 aa26.03■■□□□ 1.76
SMARCD3-203ENST00000392811 IPO11Q9UI26 975 aaKnown RBP26.03■■□□□ 1.76
SMARCD3-203ENST00000392811 ADRA1AP35348 466 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 POU6F1Q14863 301 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 KRT72Q14CN4 511 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 DLG2Q15700 870 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 ZNF280DQ6N043 979 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 LRRC49Q8IUZ0 686 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 ACVR1CQ8NER5 493 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 DBF4BQ8NFT6 615 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 AGAP11Q8TF27 550 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 VPS39Q96JC1 886 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 PCDHB7Q9Y5E2 793 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 FNDC1Q4ZHG4 1894 aaPredicted RBP26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 A0A096LPK6 155 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 OR6C75A6NL08 312 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 SERPINE1P05121 402 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 MPOP05164 745 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 YWHAQP27348 245 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 SLC1A6P48664 564 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 GPNMBQ14956 572 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 MS4A13Q5J8X5 152 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 FAM91A1Q658Y4 838 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 TFAP2DQ7Z6R9 452 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 CASD1Q96PB1 797 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 ELAC1Q9H777 363 aaKnown RBP26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 TLE6Q9H808 572 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 HMX1Q9NP08 348 aaPredicted RBP26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 PRDM5Q9NQX1 630 aaPredicted RBP26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 FNIP2Q9P278 1114 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 SLC27A5Q9Y2P5 690 aa26.02■■□□□ 1.76
SMARCD3-203ENST00000392811 FAM92AA1XBS5 289 aa26.01■■□□□ 1.75
SMARCD3-203ENST00000392811 PMPCBO75439 489 aa26.01■■□□□ 1.75
SMARCD3-203ENST00000392811 TBX18O95935 607 aa26.01■■□□□ 1.75
SMARCD3-203ENST00000392811 CCDC153Q494R4 210 aa26.01■■□□□ 1.75
SMARCD3-203ENST00000392811 UMODL1-AS1Q8N2C9 162 aa26.01■■□□□ 1.75
SMARCD3-203ENST00000392811 FBXO32Q969P5 355 aa26.01■■□□□ 1.75
SMARCD3-203ENST00000392811 PPP1R2P1Q96PQ5 205 aa26.01■■□□□ 1.75
SMARCD3-203ENST00000392811 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.01■■□□□ 1.75
SMARCD3-203ENST00000392811 MARCH5Q9NX47 278 aa26.01■■□□□ 1.75
SMARCD3-203ENST00000392811 ARMCX1Q9P291 453 aa26.01■■□□□ 1.75
SMARCD3-203ENST00000392811 HCSTQ9UBK5 93 aa26.01■■□□□ 1.75
SMARCD3-203ENST00000392811 NEBLO76041 1014 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 FGFR3P22607 806 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 IRF9Q00978 393 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 PSMD5Q16401 504 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 CLEC14AQ86T13 490 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 MIPEPQ99797 713 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 CREBZFQ9NS37 354 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 DNAJC16Q9Y2G8 782 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 CCDC22O60826 627 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 C2P06681 752 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 CPB1P15086 417 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 CPA3P15088 417 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms