RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 LIMA1Q9UHB6 759 aaKnown RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 MUTYHQ9UIF7 546 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 SIX4Q9UIU6 781 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 DCTN4Q9UJW0 460 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 AJAP1Q9UKB5 411 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 GTF3C4Q9UKN8 822 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 TSPAN16Q9UKR8 245 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 STRIP2Q9ULQ0 834 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 FAF1Q9UNN5 650 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 DNM3Q9UQ16 869 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 CDK11AQ9UQ88 783 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 ERVK-11Q9UQG0 969 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 RUVBL1Q9Y265 456 aaKnown RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 PLEKHA6Q9Y2H5 1048 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC45A1Q9Y2W3 748 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF337Q9Y3M9 751 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 PYGO1Q9Y3Y4 419 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF711Q9Y462 761 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 CD2APQ9Y5K6 639 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 SRPRBQ9Y5M8 271 aaKnown RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 ACTL7AQ9Y615 435 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 RFNGQ9Y644 331 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 AK5Q9Y6K8 562 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 SETD2Q9BYW2 2564 aaPredicted RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 CROCCQ5TZA2 2017 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 HIVEP3Q5T1R4 2406 aa-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 TPRP12270 2363 aaKnown RBP-0.28□□□□□ -2.45
TRAJ28-201ENST00000390509 MALRD1Q5VYJ5 2156 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ZFYVE26Q68DK2 2539 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 TTC28Q96AY4 2481 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 CGNL1Q0VF96 1302 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SPATA31A1Q5TZJ5 1347 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 EVPLQ92817 2033 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 A0A087WW49 117 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 A0A087WWL8 130 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 IGKV1-8A0A0C4DH67 115 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 LOC101059948A0A1B0GTJ6 334 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 A0A1B0GW55 424 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 A0A1W2PN81 502 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 FAM168BA1KXE4 195 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 DYTNA2CJ06 578 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 BLACEA4D250 179 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ASPDHA6ND91 283 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 RBMY1BA6NDE4 496 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 RBMY1EA6NEQ0 496 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 EPOPA6NHQ4 379 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 NPIPB5A8MRT5 1133 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 FOXO6A8MYZ6 492 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 KCNJ18B7U540 433 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 NPIPB4C9JG80 1138 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 E7ENQ6 273 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 E9PLN8 166 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 FAM227AF5H4B4 570 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 F8VVB4 439 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 F8VWA3 439 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 J3QRE1 110 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 NEMP1O14524 444 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 OVOL1O14753 267 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 KLF11O14901 512 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 GRM6O15303 877 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 PRODHO43272 600 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ITM2AO43736 263 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 AKR1B10O60218 316 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 CIDEAO60543 219 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 MAGEC1O60732 1142 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 NDUFS7O75251 213 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 PRPF40AO75400 957 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 GAGE7O76087 117 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ENDOD1O94919 500 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 VNN2O95498 520 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 APBB3O95704 486 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 EML2O95834 649 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 CH25HO95992 272 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 PNPP00491 289 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 THY1P04216 161 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 LDHBP07195 334 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 DCNP07585 359 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 MMP2P08253 660 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 SBK3P0C264 359 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 RBMY1DP0C7P1 496 aaKnown RBP-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 LINC00271P0C7V0 271 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 PLA2G4BP0C869 781 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 DUX4L2P0CJ85 424 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 DUX4L3P0CJ86 424 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 DUX4L5P0CJ88 424 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 DUX4L6P0CJ89 424 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 DUX4L7P0CJ90 424 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 GAGE12FP0CL80 117 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 GAGE12GP0CL81 117 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 GAGE12IP0CL82 117 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 MYBP10242 640 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 FGFR1P11362 822 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 CYP2C9P11712 490 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 ATP1A3P13637 1013 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 AKR1A1P14550 325 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 MMP9P14780 707 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 CHRM3P20309 590 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 FPR1P21462 350 aa-0.29□□□□□ -2.46
TRAJ28-201ENST00000390509 GNLYP22749 145 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms