RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 C9orf57Q5W0N0 161 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 DGAT2L7PQ6IED9 249 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
TRAV40-201ENST00000390467 SYNE3Q6ZMZ3 975 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 RASGRP2Q7LDG7 609 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 ARMC9Q7Z3E5 817 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 ATG16L2Q8NAA4 619 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 CEP76Q8TAP6 659 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 ARRDC3Q96B67 414 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 CCDC136Q96JN2 1154 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 TM6SF1Q9BZW5 370 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 TRIM31Q9BZY9 425 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 WDR12Q9GZL7 423 aaKnown RBP3.62□□□□□ -1.83
TRAV40-201ENST00000390467 CLPBQ9H078 707 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 BRD8Q9H0E9 1235 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 PABPC3Q9H361 631 aaKnown RBP3.62□□□□□ -1.83
TRAV40-201ENST00000390467 C6orf106Q9H6K1 298 aaPredicted RBP3.62□□□□□ -1.83
TRAV40-201ENST00000390467 ACAD9Q9H845 621 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 PLSCR4Q9NRQ2 329 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 UPB1Q9UBR1 384 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 C19orf53Q9UNZ5 99 aaPredicted RBP3.62□□□□□ -1.83
TRAV40-201ENST00000390467 PCDHGB1Q9Y5G3 927 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 A0A1B0GUV1 79 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 FAM90A20PA6NIJ5 464 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 EFCAB8A8MWE9 144 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 DDAH2O95865 285 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 FCGR2AP12318 317 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 ACP5P13686 325 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 PRKCHP24723 683 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 MT3P25713 68 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 SERPINA4P29622 427 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 SERPINF1P36955 418 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 KCNJ4P48050 445 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 PCP4P48539 62 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 COMPP49747 757 aaPredicted RBP3.61□□□□□ -1.83
TRAV40-201ENST00000390467 OAZ1P54368 228 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 AP2B1P63010 937 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 RPL36AP83881 106 aaKnown RBP3.61□□□□□ -1.83
TRAV40-201ENST00000390467 PDCLQ13371 301 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 ZACNQ401N2 412 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 ATPAF1Q5TC12 328 aaPredicted RBP3.61□□□□□ -1.83
TRAV40-201ENST00000390467 SULT6B1Q6IMI4 303 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 CCSAPQ6IQ19 270 aaPredicted RBP3.61□□□□□ -1.83
TRAV40-201ENST00000390467 HEPHL1Q6MZM0 1159 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 C8orf82Q6P1X6 216 aaPredicted RBP3.61□□□□□ -1.83
TRAV40-201ENST00000390467 RRAGAQ7L523 313 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 C16orf82Q7Z2V1 217 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 CUZD1Q86UP6 607 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 CLIP4Q8N3C7 705 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 STT3BQ8TCJ2 826 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 FRG2BQ96QU4 278 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 PIGSQ96S52 555 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 ZNF556Q9HAH1 456 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 KLQ9UEF7 1012 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 HERC5Q9UII4 1024 aaKnown RBP3.61□□□□□ -1.83
TRAV40-201ENST00000390467 CDH22Q9UJ99 828 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 KCND3Q9UK17 655 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 OSGIN2Q9Y236 505 aa3.61□□□□□ -1.83
TRAV40-201ENST00000390467 SAC3D1A6NKF1 404 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 VWA5AO00534 786 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 KRT86O43790 486 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 SKAP2O75563 359 aaPredicted RBP3.6□□□□□ -1.83
TRAV40-201ENST00000390467 SOX30O94993 753 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 ZBTB11O95625 1053 aaPredicted RBP3.6□□□□□ -1.83
TRAV40-201ENST00000390467 GLUD1P00367 558 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 PRSS2P07478 247 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 FCGR1AP12314 374 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 GSTM2P28161 218 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 GLUD2P49448 558 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 TNFAIP2Q03169 654 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 ALKBH1Q13686 389 aaKnown RBP3.6□□□□□ -1.83
TRAV40-201ENST00000390467 DCTN1Q14203 1278 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 KRT81Q14533 505 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 RPS6KA2Q15349 733 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 TDRD12Q587J7 1177 aaKnown RBP3.6□□□□□ -1.83
TRAV40-201ENST00000390467 TBC1D9BQ66K14 1250 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 KLHL17Q6TDP4 642 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 USP43Q70EL4 1123 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 SVIPQ8NHG7 77 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 WFIKKN2Q8TEU8 576 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 HDAC7Q8WUI4 952 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 FAR1Q8WVX9 515 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 CPT1BQ92523 772 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 C3orf49Q96BT1 292 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 CRB3Q9BUF7 120 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 HERC2P3Q9BVR0 1158 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 MST1RQ04912 1400 aa3.6□□□□□ -1.83
TRAV40-201ENST00000390467 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.59□□□□□ -1.83
TRAV40-201ENST00000390467 DDTLA6NHG4 134 aaPredicted RBP3.59□□□□□ -1.83
TRAV40-201ENST00000390467 SMTNL1A8MU46 457 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 HSPB6O14558 160 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 SYN3O14994 580 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 DDNO94850 711 aaPredicted RBP3.59□□□□□ -1.83
TRAV40-201ENST00000390467 IFIT2P09913 472 aaKnown RBP3.59□□□□□ -1.83
TRAV40-201ENST00000390467 CHN1P15882 459 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 AMTP48728 403 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 CLCNKBP51801 687 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 CDH12P55289 794 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 ERVFC1-1P60608 527 aa3.59□□□□□ -1.83
TRAV40-201ENST00000390467 BNC1Q01954 994 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms