RNA–Protein interactions for RNA: ENST00000390444.1

TRAV16-201, Transcript of T cell receptor alpha variable 16, humanhuman

APPRIS P1 BASIC

Gene TRAV16, Length 329 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16-201ENST00000390444 ADAM7Q9H2U9 754 aa5.3□□□□□ -1.56
TRAV16-201ENST00000390444 CCSER2Q9H7U1 834 aa5.3□□□□□ -1.56
TRAV16-201ENST00000390444 ETNK2Q9NVF9 386 aa5.3□□□□□ -1.56
TRAV16-201ENST00000390444 TRPM5Q9NZQ8 1165 aa5.3□□□□□ -1.56
TRAV16-201ENST00000390444 FAM153AQ9UHL3 310 aa5.3□□□□□ -1.56
TRAV16-201ENST00000390444 SLC12A6Q9UHW9 1150 aa5.3□□□□□ -1.56
TRAV16-201ENST00000390444 NUDT5Q9UKK9 219 aa5.3□□□□□ -1.56
TRAV16-201ENST00000390444 TPX2Q9ULW0 747 aaKnown RBP5.3□□□□□ -1.56
TRAV16-201ENST00000390444 MAGED2Q9UNF1 606 aaPredicted RBP5.3□□□□□ -1.56
TRAV16-201ENST00000390444 MFHAS1Q9Y4C4 1052 aa5.3□□□□□ -1.56
TRAV16-201ENST00000390444 NR2E3Q9Y5X4 410 aa5.3□□□□□ -1.56
TRAV16-201ENST00000390444 HS3ST4Q9Y661 456 aa5.3□□□□□ -1.56
TRAV16-201ENST00000390444 ZNF106Q9H2Y7 1883 aaKnown RBP5.3□□□□□ -1.56
TRAV16-201ENST00000390444 COL4A3Q01955 1670 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 A0A0A0MRY4 1105 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 GOLGA6BA6NDN3 693 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 DRGXA6NNA5 263 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 HIDE1A8MVS5 230 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 H3BNC9 293 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 LCE2BO14633 110 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 EIF3HO15372 352 aaKnown RBP eCLIP5.29□□□□□ -1.56
TRAV16-201ENST00000390444 KCNN4O15554 427 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 LPXNO60711 386 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 OPHN1O60890 802 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 STK10O94804 968 aaKnown RBP5.29□□□□□ -1.56
TRAV16-201ENST00000390444 ARHGEF15O94989 841 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 FGF19O95750 216 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 TBX18O95935 607 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 IFNB1P01574 187 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 LRG1P02750 347 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 CA3P07451 260 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 HNRNPA1P09651 372 aaKnown RBP eCLIP5.29□□□□□ -1.56
TRAV16-201ENST00000390444 NUDT17P0C025 328 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 ZSCAN5DPP0CG00 497 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 ETS1P14921 441 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 VAV1P15498 845 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 TPSB2P20231 275 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 DNAJB1P25685 340 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 DDX6P26196 483 aaKnown RBP eCLIP5.29□□□□□ -1.56
TRAV16-201ENST00000390444 RBL1P28749 1068 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 CDC25CP30307 473 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 HSD17B3P37058 310 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 GARSP41250 739 aaKnown RBP5.29□□□□□ -1.56
TRAV16-201ENST00000390444 MAPKAPK2P49137 400 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 VPS41P49754 854 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 CLCN4P51793 760 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 NDST2P52849 883 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 PMS2P54278 862 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 SLC7A9P82251 487 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 COG7P83436 770 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 GPS2Q13227 327 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 SEMA5AQ13591 1074 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 AUHQ13825 339 aaKnown RBP5.29□□□□□ -1.56
TRAV16-201ENST00000390444 CAMK1Q14012 370 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 KCNJ11Q14654 390 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 TRIP13Q15645 432 aaPredicted RBP5.29□□□□□ -1.56
TRAV16-201ENST00000390444 TPSAB1Q15661 275 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 UAP1Q16222 522 aaPredicted RBP5.29□□□□□ -1.56
TRAV16-201ENST00000390444 TAF12Q16514 161 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 PABPC1LQ4VXU2 614 aaKnown RBP5.29□□□□□ -1.56
TRAV16-201ENST00000390444 C9orf50Q5SZB4 431 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 CFAP58Q5T655 872 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 COL13A1Q5TAT6 717 aaPredicted RBP5.29□□□□□ -1.56
TRAV16-201ENST00000390444 PLPP4Q5VZY2 271 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 LRIG3Q6UXM1 1119 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 LRRC31Q6UY01 552 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 PPP1R21Q6ZMI0 780 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 TRMT10CQ7L0Y3 403 aaKnown RBP5.29□□□□□ -1.56
TRAV16-201ENST00000390444 PRUNE1Q86TP1 453 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 MIB1Q86YT6 1006 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 LRRC49Q8IUZ0 686 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 ARHGAP12Q8IWW6 846 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 PPIL6Q8IXY8 311 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 IQCKQ8N0W5 287 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 UMODL1-AS1Q8N2C9 162 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 ELMOD1Q8N336 334 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 NAT8LQ8N9F0 302 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 LEMD2Q8NC56 503 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 KREMEN2Q8NCW0 462 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 HTR3CQ8WXA8 447 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 CPT1BQ92523 772 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 GDAP1L1Q96MZ0 367 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 SPATA13Q96N96 652 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 CNTNAP3BQ96NU0 1288 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 TSGA13Q96PP4 275 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 TGS1Q96RS0 853 aaKnown RBP5.29□□□□□ -1.56
TRAV16-201ENST00000390444 VAT1Q99536 393 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 SH3GL2Q99962 352 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 FRMD8Q9BZ67 464 aaPredicted RBP5.29□□□□□ -1.56
TRAV16-201ENST00000390444 CNTNAP3Q9BZ76 1288 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 ZYG11BQ9C0D3 744 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 SIK2Q9H0K1 926 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 LMAN2LQ9H0V9 348 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 PABPC3Q9H361 631 aaKnown RBP5.29□□□□□ -1.56
TRAV16-201ENST00000390444 PRDM12Q9H4Q4 367 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 LIN7BQ9HAP6 207 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 ZNF334Q9HCZ1 680 aaPredicted RBP5.29□□□□□ -1.56
TRAV16-201ENST00000390444 ALG13Q9NP73 1137 aaKnown RBP5.29□□□□□ -1.56
TRAV16-201ENST00000390444 MED4Q9NPJ6 270 aa5.29□□□□□ -1.56
TRAV16-201ENST00000390444 EIF2B3Q9NR50 452 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms