RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 DUSP3P51452 185 aaPredicted RBP12.12□□□□□ -0.47
SOD1-202ENST00000389995 NUCB2P80303 420 aa12.12□□□□□ -0.47
SOD1-202ENST00000389995 CENPCQ03188 943 aa12.12□□□□□ -0.47
SOD1-202ENST00000389995 FZD2Q14332 565 aa12.12□□□□□ -0.47
SOD1-202ENST00000389995 TPRG1LQ5T0D9 272 aa12.12□□□□□ -0.47
SOD1-202ENST00000389995 CXorf57Q6NSI4 855 aaKnown RBP12.12□□□□□ -0.47
SOD1-202ENST00000389995 LCLAT1Q6UWP7 414 aa12.12□□□□□ -0.47
SOD1-202ENST00000389995 ATG14Q6ZNE5 492 aa12.12□□□□□ -0.47
SOD1-202ENST00000389995 RBM44Q6ZP01 1051 aaKnown RBP12.12□□□□□ -0.47
SOD1-202ENST00000389995 HORMAD1Q86X24 394 aa12.12□□□□□ -0.47
SOD1-202ENST00000389995 FAM149B1Q96BN6 582 aa12.12□□□□□ -0.47
SOD1-202ENST00000389995 CCDC97Q96F63 343 aaPredicted RBP12.12□□□□□ -0.47
SOD1-202ENST00000389995 BMFQ96LC9 184 aa12.12□□□□□ -0.47
SOD1-202ENST00000389995 SERPINB11Q96P15 392 aa12.12□□□□□ -0.47
SOD1-202ENST00000389995 ARHGAP9Q9BRR9 750 aa12.12□□□□□ -0.47
SOD1-202ENST00000389995 STARD5Q9NSY2 213 aa12.12□□□□□ -0.47
SOD1-202ENST00000389995 TJP2Q9UDY2 1190 aa12.12□□□□□ -0.47
SOD1-202ENST00000389995 TEP1Q99973 2627 aaKnown RBP12.12□□□□□ -0.47
SOD1-202ENST00000389995 CENPEQ02224 2701 aa12.12□□□□□ -0.47
SOD1-202ENST00000389995 KPNA3O00505 521 aaPredicted RBP12.11□□□□□ -0.47
SOD1-202ENST00000389995 MCF2LO15068 1137 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 RAD51BO15315 384 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 SUV39H1O43463 412 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 ATP9BO43861 1147 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 LZTS3O60299 673 aaPredicted RBP12.11□□□□□ -0.47
SOD1-202ENST00000389995 MT-CO1P00395 513 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 GGCXP38435 758 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 PDX1P52945 283 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 FGL2Q14314 439 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 NFIL3Q16649 462 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 DCAF17Q5H9S7 520 aaPredicted RBP12.11□□□□□ -0.47
SOD1-202ENST00000389995 ZCCHC8Q6NZY4 707 aaKnown RBP12.11□□□□□ -0.47
SOD1-202ENST00000389995 TMEM270Q6UE05 265 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 USP53Q70EK8 1073 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 ABI3BPQ7Z7G0 1075 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 CLEC14AQ86T13 490 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 ARL14Q8N4G2 192 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 UBR7Q8N806 425 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 LMX1AQ8TE12 382 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 SNX21Q969T3 373 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 ALG14Q96F25 216 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 TCEAL2Q9H3H9 227 aaPredicted RBP12.11□□□□□ -0.47
SOD1-202ENST00000389995 SLC25A13Q9UJS0 675 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 PCDHGA8Q9Y5G5 932 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 LRP4O75096 1905 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 ICE1Q9Y2F5 2266 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 SDK2Q58EX2 2172 aa12.11□□□□□ -0.47
SOD1-202ENST00000389995 ARHGEF17Q96PE2 2063 aaPredicted RBP12.1□□□□□ -0.47
SOD1-202ENST00000389995 ANKRD36A6QL64 1941 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 SYNJ2BP-COX16A0A087WUM0 186 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 A0A1B0GVL5 298 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 F5H5T6 163 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 K7ERQ8 282 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 NOBOXO60393 691 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 APOEP02649 317 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 HGFP14210 728 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 RPL13P26373 211 aaKnown RBP12.1□□□□□ -0.47
SOD1-202ENST00000389995 SLC5A2P31639 672 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 PLK1P53350 603 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 HNRNPKP61978 463 aaKnown RBP eCLIP12.1□□□□□ -0.47
SOD1-202ENST00000389995 CYP4F2P78329 520 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 SULT2A1Q06520 285 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 C1orf61Q13536 156 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 TCERG1LQ5VWI1 586 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 B3GNT8Q7Z7M8 397 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 JAMLQ86YT9 394 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 SMYD4Q8IYR2 804 aaPredicted RBP12.1□□□□□ -0.47
SOD1-202ENST00000389995 RBFAQ8N0V3 343 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 SH2D3CQ8N5H7 860 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 CHST14Q8NCH0 376 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 WDR36Q8NI36 951 aaKnown RBP12.1□□□□□ -0.47
SOD1-202ENST00000389995 ERCC4Q92889 916 aaPredicted RBP12.1□□□□□ -0.47
SOD1-202ENST00000389995 KAT5Q92993 513 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 FAXDC2Q96IV6 333 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 PRMT1Q99873 361 aaKnown RBP12.1□□□□□ -0.47
SOD1-202ENST00000389995 FEM1AQ9BSK4 669 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 DUSP23Q9BVJ7 150 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 ST7Q9NRC1 585 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 COX16Q9P0S2 106 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 ANKMY1Q9P2S6 941 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 ATXN7L1Q9ULK2 861 aaPredicted RBP12.1□□□□□ -0.47
SOD1-202ENST00000389995 PCDHB4Q9Y5E5 795 aa12.1□□□□□ -0.47
SOD1-202ENST00000389995 SPENQ96T58 3664 aaKnown RBP12.09□□□□□ -0.47
SOD1-202ENST00000389995 ITPR2Q14571 2701 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 EME2A4GXA9 379 aaPredicted RBP12.09□□□□□ -0.47
SOD1-202ENST00000389995 A6NNZ2 444 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 SPINT1O43278 529 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 AQP9O43315 295 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 SNAP91O60641 907 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 ENDOD1O94919 500 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 PAK4O96013 591 aaPredicted RBP12.09□□□□□ -0.47
SOD1-202ENST00000389995 CSF2P04141 144 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 PFKFB1P16118 471 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 CHRNA3P32297 505 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 ENPEPQ07075 957 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 SLC12A1Q13621 1099 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 NR0B2Q15466 257 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 ZCWPW2Q504Y3 356 aa12.09□□□□□ -0.47
SOD1-202ENST00000389995 ZNF574Q6ZN55 896 aaPredicted RBP12.09□□□□□ -0.47
SOD1-202ENST00000389995 VASH2Q86V25 355 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms