RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 GAD1Q99259 594 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 DDX28Q9NUL7 540 aaKnown RBP12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 TAS2R13Q9NYV9 303 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 NUDT5Q9UKK9 219 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 PSMD13Q9UNM6 376 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 TRIM38O00635 465 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 IRF6O14896 467 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 PLIN3O60664 434 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 LTA4HP09960 611 aaKnown RBP12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 GRIA3P42263 894 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 NR1H2P55055 460 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 NEDD8Q15843 81 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 CAMK1DQ8IU85 385 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 NAT8LQ8N9F0 302 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 TERB1Q8NA31 727 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 TSPAN14Q8NG11 270 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 RNF145Q96MT1 663 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 ALG9Q9H6U8 611 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 POLG2Q9UHN1 485 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 WASF2Q9Y6W5 498 aa12.91□□□□□ -0.34
DNMT3A-204ENST00000380756 CAPN8A6NHC0 703 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 TRAFD1O14545 582 aaPredicted RBP12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 PEX11AO75192 247 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 RAB10P61026 200 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 PPM1JQ5JR12 505 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 PMF1Q6P1K2 205 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 TRMT10BQ6PF06 316 aaKnown RBP12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 STK32CQ86UX6 486 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 VPS37AQ8NEZ2 397 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 EME2A4GXA9 379 aaPredicted RBP12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 C2CD4BA6NLJ0 364 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 ZNF839A8K0R7 811 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 GPR25O00155 361 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 CCNB1P14635 433 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 HOXB8P17481 243 aaPredicted RBP12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 SERPINH1P50454 418 aaKnown RBP12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 CCNHP51946 323 aaPredicted RBP12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 GTF2A2P52657 109 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 SLC25A52Q3SY17 297 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 FAM126BQ8IXS8 530 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 FNDC5Q8NAU1 212 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 RDH11Q8TC12 318 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 CLPBQ9H078 707 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 SYNCRIPO60506 623 aaKnown RBP12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 GRM5P41594 1212 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 OXCT1P55809 520 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 TBX4P57082 545 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 TRAF2Q12933 501 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 FAM98BQ52LJ0 330 aaKnown RBP12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 SERPINB11Q96P15 392 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 ASB2Q96Q27 587 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 SH3GL1Q99961 368 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 RTKNQ9BST9 563 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 MTIF3Q9H2K0 278 aaKnown RBP12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 RHOJQ9H4E5 214 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 ZNF556Q9HAH1 456 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 SPAG4Q9NPE6 437 aa12.9□□□□□ -0.34
DNMT3A-204ENST00000380756 ATRNL1Q5VV63 1379 aa12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 ATP6AP2A0A1C7CYW4 349 aa12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 MDM4O15151 490 aa12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 ZSCAN9O15535 394 aaPredicted RBP12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 ATP6AP2O75787 350 aa12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 HNRNPLP14866 589 aaKnown RBP eCLIP12.9□□□□□ -0.352e-11■■■■□ 20.2
DNMT3A-204ENST00000380756 TFEBP19484 476 aa12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 SERPINB1P30740 379 aa12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 NRLP54845 237 aa12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 MRPS5P82675 430 aaKnown RBP12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 CERCAMQ5T4B2 595 aa12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 VWA5B1Q5TIE3 1220 aa12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 METTL21CQ5VZV1 264 aa12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 MAP1SQ66K74 1059 aaPredicted RBP12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 CENPLQ8N0S6 344 aaPredicted RBP12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 NIPA2Q8N8Q9 360 aa12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 MAB21L3Q8N8X9 362 aa12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 BHMTQ93088 406 aa12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 ZMAT2Q96NC0 199 aaKnown RBP12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 GPR20Q99678 358 aa12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 MRPL57Q9BQC6 102 aaKnown RBP12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 CDH22Q9UJ99 828 aa12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 LSM7Q9UK45 103 aaKnown RBP12.9□□□□□ -0.35
DNMT3A-204ENST00000380756 MYH15Q9Y2K3 1946 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 TSPAN3O60637 253 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 CYP2C18P33260 490 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 GSCP56915 257 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 TCEAL1Q15170 157 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 SLC5A9Q2M3M2 681 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 KIAA2013Q8IYS2 634 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 GPC2Q8N158 579 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 TMEM86AQ8N2M4 240 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 SPATA6LQ8N4H0 392 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 CMASQ8NFW8 434 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 PCDH19Q8TAB3 1148 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 EXOSC4Q9NPD3 245 aaKnown RBP12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 ETAA1Q9NY74 926 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 LMCD1Q9NZU5 365 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 C15orf38-AP3S2A0A0A6YYH1 394 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 CFAP99D6REC4 459 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 TBX10O75333 385 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 BCL10O95999 233 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 MPSTP25325 297 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms