RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 RETSATQ6NUM9 610 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 BZW1Q7L1Q6 419 aaKnown RBP19.18■□□□□ 0.66
SMN2-202ENST00000380742 ZC3H18Q86VM9 953 aaKnown RBP19.18■□□□□ 0.66
SMN2-202ENST00000380742 CREG2Q8IUH2 290 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 ZNF513Q8N8E2 541 aaPredicted RBP19.18■□□□□ 0.66
SMN2-202ENST00000380742 CCNYQ8ND76 341 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 PJA1Q8NG27 643 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 ZNF592Q92610 1267 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 CAPZA3Q96KX2 299 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 TSGA13Q96PP4 275 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 SP110Q9HB58 689 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 PLA2G4CQ9UP65 541 aa19.18■□□□□ 0.66
SMN2-202ENST00000380742 CKAP5Q14008 2032 aa19.17■□□□□ 0.66
SMN2-202ENST00000380742 TMEM221A6NGB7 291 aa19.17■□□□□ 0.66
SMN2-202ENST00000380742 ZSCAN5CA6NGD5 496 aaPredicted RBP19.17■□□□□ 0.66
SMN2-202ENST00000380742 K7ERQ8 282 aa19.17■□□□□ 0.66
SMN2-202ENST00000380742 M0R296 226 aa19.17■□□□□ 0.66
SMN2-202ENST00000380742 PGRMC1O00264 195 aaKnown RBP19.17■□□□□ 0.66
SMN2-202ENST00000380742 ZNF500O60304 480 aaPredicted RBP19.17■□□□□ 0.66
SMN2-202ENST00000380742 PEX11BO96011 259 aa19.17■□□□□ 0.66
SMN2-202ENST00000380742 SRCP12931 536 aa19.17■□□□□ 0.66
SMN2-202ENST00000380742 CCNCP24863 283 aa19.17■□□□□ 0.66
SMN2-202ENST00000380742 CWF19L1Q69YN2 538 aaKnown RBP19.17■□□□□ 0.66
SMN2-202ENST00000380742 CCDC105Q8IYK2 499 aa19.17■□□□□ 0.66
SMN2-202ENST00000380742 SH2D3CQ8N5H7 860 aa19.17■□□□□ 0.66
SMN2-202ENST00000380742 TTC13Q8NBP0 860 aa19.17■□□□□ 0.66
SMN2-202ENST00000380742 FLCNQ8NFG4 579 aa19.17■□□□□ 0.66
SMN2-202ENST00000380742 KCNV2Q8TDN2 545 aa19.17■□□□□ 0.66
SMN2-202ENST00000380742 USP33Q8TEY7 942 aa19.17■□□□□ 0.66
SMN2-202ENST00000380742 COL25A1Q9BXS0 654 aaPredicted RBP19.17■□□□□ 0.66
SMN2-202ENST00000380742 OSBPL6Q9BZF3 934 aa19.17■□□□□ 0.66
SMN2-202ENST00000380742 HS3ST2Q9Y278 367 aa19.17■□□□□ 0.66
SMN2-202ENST00000380742 CXorf51AA0A1B0GTR3 108 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 WASH3PC4AMC7 463 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 PPP1R12AO14974 1030 aaPredicted RBP19.16■□□□□ 0.66
SMN2-202ENST00000380742 SMAD6O43541 496 aaKnown RBP19.16■□□□□ 0.66
SMN2-202ENST00000380742 IL12RB1P42701 662 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 SERPINH1P50454 418 aaKnown RBP19.16■□□□□ 0.66
SMN2-202ENST00000380742 VASPP50552 380 aaPredicted RBP19.16■□□□□ 0.66
SMN2-202ENST00000380742 EIF3EP60228 445 aaKnown RBP19.16■□□□□ 0.66
SMN2-202ENST00000380742 MRPS21P82921 87 aaKnown RBP19.16■□□□□ 0.66
SMN2-202ENST00000380742 SLC20A2Q08357 652 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 AP1B1Q10567 949 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 XRCC4Q13426 336 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 LRRC32Q14392 662 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 PRKD1Q15139 912 aaPredicted RBP19.16■□□□□ 0.66
SMN2-202ENST00000380742 PKN3Q6P5Z2 889 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 Q6ZS52 159 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 CCDC13Q8IYE1 715 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 ALLCQ8N6M5 410 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 IL17RCQ8NAC3 791 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 ATP11CQ8NB49 1132 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 SLC35B2Q8TB61 432 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 MAIP1Q8WWC4 291 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 C1orf54Q8WWF1 131 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 ATG4AQ8WYN0 398 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 TMEM245Q9H330 911 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 MFSD1Q9H3U5 465 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 C10orf88Q9H8K7 445 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 CACNA2D2Q9NY47 1150 aa19.16■□□□□ 0.66
SMN2-202ENST00000380742 UBA2Q9UBT2 640 aaPredicted RBP19.16■□□□□ 0.66
SMN2-202ENST00000380742 ANKRD36A6QL64 1941 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 RBP3P10745 1247 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 VAV1P15498 845 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 GEMIN4P57678 1058 aaKnown RBP19.15■□□□□ 0.66
SMN2-202ENST00000380742 ZNF33AQ06730 810 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 SLC10A7Q0GE19 358 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 ENPP2Q13822 863 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 FNDC3BQ53EP0 1204 aaKnown RBP19.15■□□□□ 0.66
SMN2-202ENST00000380742 INO80DQ53TQ3 878 aaPredicted RBP19.15■□□□□ 0.66
SMN2-202ENST00000380742 FAM182AQ5T1J6 154 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 SYNPOQ8N3V7 929 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 ZNF366Q8N895 744 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 PRELID2Q8N945 189 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 KDM1BQ8NB78 822 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 RPLP0P6Q8NHW5 317 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 TFB1MQ8WVM0 346 aaKnown RBP19.15■□□□□ 0.66
SMN2-202ENST00000380742 FATE1Q969F0 183 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 CLDN23Q96B33 292 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 ZNF599Q96NL3 588 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 QKIQ96PU8 341 aaKnown RBP eCLIP19.15■□□□□ 0.66
SMN2-202ENST00000380742 AP1M1Q9BXS5 423 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 BRD8Q9H0E9 1235 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 DNPEPQ9ULA0 475 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 FCF1Q9Y324 198 aaKnown RBP19.15■□□□□ 0.66
SMN2-202ENST00000380742 SIT1Q9Y3P8 196 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 STON1Q9Y6Q2 735 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 TTC28Q96AY4 2481 aa19.15■□□□□ 0.66
SMN2-202ENST00000380742 TTC34A8MYJ7 566 aa19.14■□□□□ 0.65
SMN2-202ENST00000380742 HACD1B0YJ81 288 aa19.14■□□□□ 0.65
SMN2-202ENST00000380742 H7C0C1 242 aa19.14■□□□□ 0.65
SMN2-202ENST00000380742 TNFRSF10AO00220 468 aa19.14■□□□□ 0.65
SMN2-202ENST00000380742 PDE2AO00408 941 aaPredicted RBP19.14■□□□□ 0.65
SMN2-202ENST00000380742 MCF2LO15068 1137 aa19.14■□□□□ 0.65
SMN2-202ENST00000380742 MATN3O15232 486 aa19.14■□□□□ 0.65
SMN2-202ENST00000380742 LIASO43766 372 aa19.14■□□□□ 0.65
SMN2-202ENST00000380742 ATP9BO43861 1147 aa19.14■□□□□ 0.65
SMN2-202ENST00000380742 ADAM23O75077 832 aa19.14■□□□□ 0.65
SMN2-202ENST00000380742 ZNF821O75541 412 aaPredicted RBP19.14■□□□□ 0.65
SMN2-202ENST00000380742 KLF8O95600 359 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms