RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 PALB2Q86YC2 1186 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 MSL3Q8N5Y2 521 aaKnown RBP16.27■□□□□ 0.2
COL2A1-202ENST00000380518 RAD21L1Q9H4I0 556 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 NFICP08651 508 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 PDK4Q16654 411 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 FAM187BQ17R55 369 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 ZACNQ401N2 412 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 ZNF621Q6ZSS3 439 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 NRCAMQ92823 1304 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 WDR18Q9BV38 432 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 INVSQ9Y283 1065 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 PCDHA11Q9Y5I1 949 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 C1orf232A0A0U1RR37 186 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 RCCD1A6NED2 376 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 RECQL5O94762 991 aaPredicted RBP16.27■□□□□ 0.2
COL2A1-202ENST00000380518 ABCG1P45844 678 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 SGCGQ13326 291 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 RSBN1Q5VWQ0 802 aaPredicted RBP16.27■□□□□ 0.2
COL2A1-202ENST00000380518 ARCQ7LC44 396 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 SYT12Q8IV01 421 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 ADAM2Q99965 735 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 ZNF670Q9BS34 389 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 ALG9Q9H6U8 611 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 ANAPC2Q9UJX6 822 aa16.27■□□□□ 0.2
COL2A1-202ENST00000380518 A0A0U1RQJ8 604 aa16.27■□□□□ 0.19
COL2A1-202ENST00000380518 H3BN98 237 aa16.27■□□□□ 0.19
COL2A1-202ENST00000380518 CATP04040 527 aaKnown RBP16.27■□□□□ 0.19
COL2A1-202ENST00000380518 CNPP09543 421 aaKnown RBP16.27■□□□□ 0.19
COL2A1-202ENST00000380518 HPCAL1P37235 193 aa16.27■□□□□ 0.19
COL2A1-202ENST00000380518 ATP13A4Q4VNC1 1196 aa16.27■□□□□ 0.19
COL2A1-202ENST00000380518 DSG4Q86SJ6 1040 aa16.27■□□□□ 0.19
COL2A1-202ENST00000380518 ZNF557Q8N988 423 aaPredicted RBP16.27■□□□□ 0.19
COL2A1-202ENST00000380518 C18orf25Q96B23 403 aaPredicted RBP16.27■□□□□ 0.19
COL2A1-202ENST00000380518 C19orf60Q96EN9 201 aa16.27■□□□□ 0.19
COL2A1-202ENST00000380518 CDCA5Q96FF9 252 aa16.27■□□□□ 0.19
COL2A1-202ENST00000380518 NFKBIZQ9BYH8 718 aa16.27■□□□□ 0.19
COL2A1-202ENST00000380518 RIBC2Q9H4K1 309 aa16.27■□□□□ 0.19
COL2A1-202ENST00000380518 ZNF446Q9NWS9 450 aa16.27■□□□□ 0.19
COL2A1-202ENST00000380518 NUDT5Q9UKK9 219 aa16.27■□□□□ 0.19
COL2A1-202ENST00000380518 FAM237BA0A1B0GVD1 139 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 FAM25AB3EWG3 89 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 FAM25CB3EWG5 89 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 FAM25GB3EWG6 89 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 MAFO75444 373 aaPredicted RBP16.26■□□□□ 0.19
COL2A1-202ENST00000380518 CYP7B1O75881 506 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 ATP4AP20648 1035 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 ATP5C1P36542 298 aaKnown RBP16.26■□□□□ 0.19
COL2A1-202ENST00000380518 CLCN5P51795 746 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 PPIL2Q13356 520 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 PFKFB4Q16877 469 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 SHROOM1Q2M3G4 852 aaPredicted RBP16.26■□□□□ 0.19
COL2A1-202ENST00000380518 CAMK1DQ8IU85 385 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 KIAA0319LQ8IZA0 1049 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 PCDH20Q8N6Y1 951 aaKnown RBP16.26■□□□□ 0.19
COL2A1-202ENST00000380518 DCUN1D5Q9BTE7 237 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 C2orf49Q9BVC5 232 aaPredicted RBP16.26■□□□□ 0.19
COL2A1-202ENST00000380518 PAIP1Q9H074 479 aaKnown RBP16.26■□□□□ 0.19
COL2A1-202ENST00000380518 SEMA4BQ9NPR2 832 aaPredicted RBP16.26■□□□□ 0.19
COL2A1-202ENST00000380518 FSCN2O14926 492 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 NOMO3P69849 1222 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 EPS8Q12929 822 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 PCBP1Q15365 356 aaKnown RBP eCLIP16.26■□□□□ 0.19
COL2A1-202ENST00000380518 PIGZQ86VD9 579 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 LRRC49Q8IUZ0 686 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 GPC2Q8N158 579 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 PYDC1Q8WXC3 89 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 CDT1Q9H211 546 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 CALCAP01258 141 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 CCDC166P0CW27 439 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 ACADMP11310 421 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 PAICSP22234 425 aaKnown RBP16.26■□□□□ 0.19
COL2A1-202ENST00000380518 KLRC2P26717 231 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 NOS3P29474 1203 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 MAGEA10P43363 369 aaPredicted RBP16.26■□□□□ 0.19
COL2A1-202ENST00000380518 MARCKSL1P49006 195 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 ACOX1Q15067 660 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 CYP2A13Q16696 494 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 BMT2Q1RMZ1 405 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 ZC3H12AQ5D1E8 599 aaKnown RBP16.26■□□□□ 0.19
COL2A1-202ENST00000380518 FGD3Q5JSP0 725 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 CATSPERGQ6ZRH7 1159 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 EPHX4Q8IUS5 362 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 ANKRD52Q8NB46 1076 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 MPP4Q96JB8 637 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 HSD17B14Q9BPX1 270 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 ACSS3Q9H6R3 686 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 PTGES3LE9PB15 166 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 SLC9A5Q14940 896 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 PABPC1LQ4VXU2 614 aaKnown RBP16.26■□□□□ 0.19
COL2A1-202ENST00000380518 PACS2Q86VP3 889 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 BBS4Q96RK4 519 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 FAM192AQ9GZU8 254 aa16.26■□□□□ 0.19
COL2A1-202ENST00000380518 THG1LQ9NWX6 298 aaKnown RBP16.26■□□□□ 0.19
COL2A1-202ENST00000380518 PNMA8CA0A1B0GUJ8 204 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 EPN2O95208 641 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 BST1Q10588 318 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 STXBP5Q5T5C0 1151 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 MAP1SQ66K74 1059 aaPredicted RBP16.25■□□□□ 0.19
COL2A1-202ENST00000380518 USP45Q70EL2 814 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 ADHFE1Q8IWW8 467 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms