RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 CCDC22O60826 627 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 JCHAINP01591 159 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 SERPINB8P50452 374 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 LIMK2P53671 638 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 PREPLQ4J6C6 727 aaPredicted RBP21.94■■□□□ 1.1
TRIM54-202ENST00000380075 RWDD4Q6NW29 188 aaKnown RBP21.94■■□□□ 1.1
TRIM54-202ENST00000380075 NPAS4Q8IUM7 802 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 ATPAF2Q8N5M1 289 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 UTP4Q969X6 686 aaKnown RBP21.94■■□□□ 1.1
TRIM54-202ENST00000380075 FUBP3Q96I24 572 aaKnown RBP eCLIP21.94■■□□□ 1.1
TRIM54-202ENST00000380075 NSL1Q96IY1 281 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 ELAC1Q9H777 363 aaKnown RBP21.94■■□□□ 1.1
TRIM54-202ENST00000380075 FNIP2Q9P278 1114 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 PTPRDP23468 1912 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 ITGB1P05556 798 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 CALB2P22676 271 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 TYK2P29597 1187 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 DSC1Q08554 894 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 CCDC153Q494R4 210 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 FASTKD1Q53R41 847 aaKnown RBP21.94■■□□□ 1.1
TRIM54-202ENST00000380075 HERC6Q8IVU3 1022 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 PPP1R14CQ8TAE6 165 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 PHOSPHO2Q8TCD6 241 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 URGCPQ8TCY9 931 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 TBC1D10AQ9BXI6 508 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 SLC17A6Q9P2U8 582 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 EMCNQ9ULC0 261 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 NLRC5Q86WI3 1866 aa21.94■■□□□ 1.1
TRIM54-202ENST00000380075 MYO18AQ92614 2054 aaKnown RBP21.93■■□□□ 1.1
TRIM54-202ENST00000380075 USP12O75317 370 aa21.93■■□□□ 1.1
TRIM54-202ENST00000380075 OAZ2O95190 189 aa21.93■■□□□ 1.1
TRIM54-202ENST00000380075 GRK2P25098 689 aa21.93■■□□□ 1.1
TRIM54-202ENST00000380075 HADHAP40939 763 aa21.93■■□□□ 1.1
TRIM54-202ENST00000380075 GATMP50440 423 aa21.93■■□□□ 1.1
TRIM54-202ENST00000380075 TIGD7Q6NT04 549 aaPredicted RBP21.93■■□□□ 1.1
TRIM54-202ENST00000380075 PTCD3Q96EY7 689 aaKnown RBP21.93■■□□□ 1.1
TRIM54-202ENST00000380075 CELF6Q96J87 481 aaKnown RBP21.93■■□□□ 1.1
TRIM54-202ENST00000380075 SERPINB11Q96P15 392 aa21.93■■□□□ 1.1
TRIM54-202ENST00000380075 ZCWPW1Q9H0M4 648 aa21.93■■□□□ 1.1
TRIM54-202ENST00000380075 FAM96AQ9H5X1 160 aa21.93■■□□□ 1.1
TRIM54-202ENST00000380075 STN1Q9H668 368 aaKnown RBP21.93■■□□□ 1.1
TRIM54-202ENST00000380075 HBS1LQ9Y450 684 aaKnown RBP21.93■■□□□ 1.1
TRIM54-202ENST00000380075 TTC3P53804 2025 aa21.93■■□□□ 1.1
TRIM54-202ENST00000380075 TIMM44O43615 452 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 PAGE1O75459 146 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 ANXA9O76027 345 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 GJB5O95377 273 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 GSRP00390 522 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 MPOP05164 745 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 NFE2Q16621 373 aaPredicted RBP21.92■■□□□ 1.1
TRIM54-202ENST00000380075 TEDDM1Q5T9Z0 273 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 MBLAC2Q68D91 279 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 CES3Q6UWW8 571 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 ARID3BQ8IVW6 561 aaPredicted RBP21.92■■□□□ 1.1
TRIM54-202ENST00000380075 CCDC117Q8IWD4 279 aaPredicted RBP21.92■■□□□ 1.1
TRIM54-202ENST00000380075 ARHGAP12Q8IWW6 846 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 FCRL5Q96RD9 977 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 CCDC195A0A1B0GUA6 201 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 CLLU1OSQ5K130 101 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 STRA8Q7Z7C7 330 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 SCD5Q86SK9 330 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 CEP57Q86XR8 500 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 ARHGAP18Q8N392 663 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 AGAP11Q8TF27 550 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 IL12RB2Q99665 862 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 ZBED2Q9BTP6 218 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 SIK2Q9H0K1 926 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 SNX15Q9NRS6 342 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 NUMBLQ9Y6R0 609 aa21.92■■□□□ 1.1
TRIM54-202ENST00000380075 FCHO1O14526 889 aa21.91■■□□□ 1.1
TRIM54-202ENST00000380075 MATN3O15232 486 aa21.91■■□□□ 1.1
TRIM54-202ENST00000380075 PROCP04070 461 aa21.91■■□□□ 1.1
TRIM54-202ENST00000380075 SERPINE1P05121 402 aa21.91■■□□□ 1.1
TRIM54-202ENST00000380075 OLIG2Q13516 323 aa21.91■■□□□ 1.1
TRIM54-202ENST00000380075 TBCCQ15814 346 aa21.91■■□□□ 1.1
TRIM54-202ENST00000380075 NOMO2Q5JPE7 1267 aa21.91■■□□□ 1.1
TRIM54-202ENST00000380075 ARMC3Q5W041 872 aa21.91■■□□□ 1.1
TRIM54-202ENST00000380075 PDPK2PQ6A1A2 396 aa21.91■■□□□ 1.1
TRIM54-202ENST00000380075 KCNMB4Q86W47 210 aa21.91■■□□□ 1.1
TRIM54-202ENST00000380075 LONP2Q86WA8 852 aa21.91■■□□□ 1.1
TRIM54-202ENST00000380075 WDR75Q8IWA0 830 aaKnown RBP21.91■■□□□ 1.1
TRIM54-202ENST00000380075 FCRL2Q96LA5 508 aaPredicted RBP21.91■■□□□ 1.1
TRIM54-202ENST00000380075 C8orf48Q96LL4 319 aa21.91■■□□□ 1.1
TRIM54-202ENST00000380075 KIFC1Q9BW19 673 aa21.91■■□□□ 1.1
TRIM54-202ENST00000380075 FBXO44Q9H4M3 255 aa21.91■■□□□ 1.1
TRIM54-202ENST00000380075 SCML2Q9UQR0 700 aa21.91■■□□□ 1.1
TRIM54-202ENST00000380075 WASH4PA8MWX3 477 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 DFFAO00273 331 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 ATP9BO43861 1147 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 SLC2A3P11169 496 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 GTF2A1P52655 376 aaPredicted RBP21.9■■□□□ 1.1
TRIM54-202ENST00000380075 MPP3Q13368 585 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 WASHC2DQ5SRD0 308 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 CERCAMQ5T4B2 595 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 MSANTD2Q6P1R3 559 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 MON1AQ86VX9 555 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 DCLK2Q8N568 766 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 CNTD1Q8N815 330 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 CASP10Q92851 521 aa21.9■■□□□ 1.1
TRIM54-202ENST00000380075 C1orf74Q96LT6 269 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms