RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 CYS1Q717R9 158 aa17.68■□□□□ 0.42
THUMPD2-201ENST00000378727 LRRC6Q86X45 466 aa17.68■□□□□ 0.42
THUMPD2-201ENST00000378727 CCNJLQ8IV13 435 aa17.68■□□□□ 0.42
THUMPD2-201ENST00000378727 CTAGE3PQ8IX95 158 aa17.68■□□□□ 0.42
THUMPD2-201ENST00000378727 DNAAF3Q8N9W5 541 aa17.68■□□□□ 0.42
THUMPD2-201ENST00000378727 SPPL3Q8TCT6 385 aa17.68■□□□□ 0.42
THUMPD2-201ENST00000378727 EPN3Q9H201 632 aa17.68■□□□□ 0.42
THUMPD2-201ENST00000378727 UGT1A7Q9HAW7 530 aa17.68■□□□□ 0.42
THUMPD2-201ENST00000378727 UGT1A10Q9HAW8 530 aa17.68■□□□□ 0.42
THUMPD2-201ENST00000378727 UGT1A8Q9HAW9 530 aa17.68■□□□□ 0.42
THUMPD2-201ENST00000378727 PPANQ9NQ55 473 aaKnown RBP17.68■□□□□ 0.42
THUMPD2-201ENST00000378727 ENTPD7Q9NQZ7 604 aa17.68■□□□□ 0.42
THUMPD2-201ENST00000378727 MTCL1Q9Y4B5 1905 aaKnown RBP17.68■□□□□ 0.42
THUMPD2-201ENST00000378727 LINC01553A4QN01 128 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 PSMD3O43242 534 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 GREM1O60565 184 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 ANXA9O76027 345 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 ARHGEF15O94989 841 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 LRG1P02750 347 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 INHBAP08476 426 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 RENBPP51606 427 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 CYP4F8P98187 520 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 CERCAMQ5T4B2 595 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 NAPEPLDQ6IQ20 393 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 LEKR1Q6ZMV7 388 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 SLC26A11Q86WA9 606 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 ZNF354CQ86Y25 554 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 TEX26Q8N6G2 289 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 MRPL43Q8N983 215 aaKnown RBP17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 PABPC5Q96DU9 382 aaKnown RBP17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 C17orf80Q9BSJ5 609 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 NAT9Q9BTE0 207 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 SENP1Q9P0U3 644 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 STOML2Q9UJZ1 356 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 DOCK6Q96HP0 2047 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 A0A0D9SEW6 157 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 ERICH4A6NGS2 130 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 NUMBP49757 651 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 CDH4P55283 916 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 SMAD3P84022 425 aaKnown RBP17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 IL10RBQ08334 325 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 RABGAP1LQ5R372 815 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 MARC1Q5VT66 337 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 CES3Q6UWW8 571 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 CCDC149Q6ZUS6 474 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 C4orf33Q8N1A6 199 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 IPMKQ8NFU5 416 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 POF1BQ8WVV4 589 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 FCRL3Q96P31 734 aaPredicted RBP17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 EMILIN2Q9BXX0 1053 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 RETREG1Q9H6L5 497 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 NT5MQ9NPB1 228 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 BFARQ9NZS9 450 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 IKBKGQ9Y6K9 419 aa17.67■□□□□ 0.42
THUMPD2-201ENST00000378727 SRRM3A6NNA2 597 aaPredicted RBP17.66■□□□□ 0.42
THUMPD2-201ENST00000378727 SCAMP3O14828 347 aaKnown RBP17.66■□□□□ 0.42
THUMPD2-201ENST00000378727 SPAG7O75391 227 aa17.66■□□□□ 0.42
THUMPD2-201ENST00000378727 TPH1P17752 444 aa17.66■□□□□ 0.42
THUMPD2-201ENST00000378727 HDCP19113 662 aa17.66■□□□□ 0.42
THUMPD2-201ENST00000378727 ADRA1AP35348 466 aa17.66■□□□□ 0.42
THUMPD2-201ENST00000378727 GEMP55040 296 aa17.66■□□□□ 0.42
THUMPD2-201ENST00000378727 TNK2Q07912 1038 aa17.66■□□□□ 0.42
THUMPD2-201ENST00000378727 LRRC14Q15048 493 aa17.66■□□□□ 0.42
THUMPD2-201ENST00000378727 LINC00523Q86TU6 105 aa17.66■□□□□ 0.42
THUMPD2-201ENST00000378727 ANKRD42Q8N9B4 389 aa17.66■□□□□ 0.42
THUMPD2-201ENST00000378727 MGARPQ8TDB4 240 aa17.66■□□□□ 0.42
THUMPD2-201ENST00000378727 SLC22A17Q8WUG5 538 aa17.66■□□□□ 0.42
THUMPD2-201ENST00000378727 TTC17Q96AE7 1141 aa17.66■□□□□ 0.42
THUMPD2-201ENST00000378727 TBL1YQ9BQ87 522 aa17.66■□□□□ 0.42
THUMPD2-201ENST00000378727 ZNF180Q9UJW8 692 aa17.66■□□□□ 0.42
THUMPD2-201ENST00000378727 TSPAN3O60637 253 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 PRAMEF11O60813 436 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 NEBLO76041 1014 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 GLUD1P00367 558 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 MYOGP15173 224 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 HOXD9P28356 352 aaPredicted RBP17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 NPY2RP49146 381 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 MAXP61244 160 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 GNA12Q03113 381 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 NIPAL4Q0D2K0 466 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 CDH17Q12864 832 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 IHHQ14623 411 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 DENND5AQ6IQ26 1287 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 TMEM135Q86UB9 458 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 PGBD5Q8N414 524 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 OR7D4Q8NG98 312 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 BCAS4Q8TDM0 211 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 IMP4Q96G21 291 aaKnown RBP17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 MRGPRX2Q96LB1 330 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 SMC6Q96SB8 1091 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 SLC25A51Q9H1U9 297 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 PDFQ9HBH1 243 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 MLXIPLQ9NP71 852 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 SAMD15Q9P1V8 674 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 CPQQ9Y646 472 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 RPS6KL1Q9Y6S9 549 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 CHD7Q9P2D1 2997 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 IQANK1A0A1B0GTG1 560 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 PRPF4O43172 522 aaKnown RBP eCLIP17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 ATP9BO43861 1147 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms