RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 KBTBD4Q9NVX7 518 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 TAS2R14Q9NYV8 317 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 PSMD7P51665 324 aa13.9□□□□□ -0.19
COL4A1-201ENST00000375820 NEK3P51956 506 aa13.9□□□□□ -0.19
COL4A1-201ENST00000375820 PPIDQ08752 370 aaKnown RBP13.9□□□□□ -0.19
COL4A1-201ENST00000375820 ABRQ12979 859 aa13.9□□□□□ -0.19
COL4A1-201ENST00000375820 TRMT5Q32P41 509 aaKnown RBP13.9□□□□□ -0.19
COL4A1-201ENST00000375820 ARMC3Q5W041 872 aa13.9□□□□□ -0.19
COL4A1-201ENST00000375820 ZDHHC13Q8IUH4 622 aa13.9□□□□□ -0.19
COL4A1-201ENST00000375820 REXO5Q96IC2 774 aaKnown RBP13.9□□□□□ -0.19
COL4A1-201ENST00000375820 ACSS2Q9NR19 701 aa13.9□□□□□ -0.19
COL4A1-201ENST00000375820 KCNQ5Q9NR82 932 aa13.9□□□□□ -0.19
COL4A1-201ENST00000375820 CLTCL1P53675 1640 aa13.9□□□□□ -0.19
COL4A1-201ENST00000375820 CYP4B1P13584 511 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 NELFEP18615 380 aaKnown RBP13.89□□□□□ -0.19
COL4A1-201ENST00000375820 PAX7P23759 505 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 CCT3P49368 545 aaKnown RBP13.89□□□□□ -0.19
COL4A1-201ENST00000375820 ZNF844Q08AG5 666 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 WDR93Q6P2C0 686 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 TMC3Q7Z5M5 1100 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 C4orf19Q8IY42 314 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 TEKT5Q96M29 485 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 GAD1Q99259 594 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 NRDE2Q9H7Z3 1164 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 CLEC4AQ9UMR7 237 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 SLC27A5Q9Y2P5 690 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 MAGEB16A2A368 324 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 H0Y858 1186 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 RPL4P36578 427 aaKnown RBP13.89□□□□□ -0.19
COL4A1-201ENST00000375820 GRIA3P42263 894 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 MCL1Q07820 350 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 UBAP2LQ14157 1087 aaKnown RBP13.89□□□□□ -0.19
COL4A1-201ENST00000375820 GALNT3Q14435 633 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 ZC3H12AQ5D1E8 599 aaKnown RBP13.89□□□□□ -0.19
COL4A1-201ENST00000375820 RAET1GQ6H3X3 334 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 CAPSLQ8WWF8 208 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 REEP1Q9H902 201 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 CYP3A43Q9HB55 503 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 RPRD1BQ9NQG5 326 aaKnown RBP13.89□□□□□ -0.19
COL4A1-201ENST00000375820 ZNF222Q9UK12 451 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 SLC12A4Q9UP95 1085 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 FAM25EA8MYX2 175 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 SHBGP04278 402 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 CYP2A6P11509 494 aaPredicted RBP13.89□□□□□ -0.19
COL4A1-201ENST00000375820 OR10G6Q8NH81 332 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 LPPQ93052 612 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 EPB41L4BQ9H329 900 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 SLC35C2Q9NQQ7 365 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 MROH7Q68CQ1 1323 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 IQSEC2Q5JU85 1478 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 A0A0U1RQJ8 604 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 HIST1H2ABP04908 130 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 MAXP61244 160 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 ERVK-9P63128 1117 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 ACSM2AQ08AH3 577 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 SPANXN2Q5MJ10 180 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 PERM1Q5SV97 790 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 ACSM2BQ68CK6 577 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 FAM171BQ6P995 826 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 POMZP3Q6PJE2 187 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 HIST3H2AQ7L7L0 130 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 DHRSXQ8N5I4 330 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 CCDC185Q8N715 623 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 SCAIQ8N9R8 606 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 LEMD2Q8NC56 503 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 REPS2Q8NFH8 660 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 HIST1H2ACQ93077 130 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 PWWP2AQ96N64 755 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 GLIS2Q9BZE0 524 aaPredicted RBP13.89□□□□□ -0.19
COL4A1-201ENST00000375820 TMEM138Q9NPI0 162 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 PLA2R1Q13018 1463 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 PSIP1O75475 530 aaKnown RBP13.89□□□□□ -0.19
COL4A1-201ENST00000375820 CCDC166P0CW27 439 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 ME2P23368 584 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 GPR1P46091 355 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 DPYSL3Q14195 570 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 NFE2Q16621 373 aaPredicted RBP13.89□□□□□ -0.19
COL4A1-201ENST00000375820 ADAM2Q99965 735 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 PDCD10Q9BUL8 212 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 C1orf50Q9BV19 199 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 VPS51Q9UID3 782 aa13.89□□□□□ -0.19
COL4A1-201ENST00000375820 PNMA8CA0A1B0GUJ8 204 aa13.88□□□□□ -0.19
COL4A1-201ENST00000375820 SLITRK3O94933 977 aa13.88□□□□□ -0.19
COL4A1-201ENST00000375820 BMP10O95393 424 aa13.88□□□□□ -0.19
COL4A1-201ENST00000375820 SPATA31D3P0C874 917 aa13.88□□□□□ -0.19
COL4A1-201ENST00000375820 MYBPC1Q00872 1141 aa13.88□□□□□ -0.19
COL4A1-201ENST00000375820 SLC6A3Q01959 620 aa13.88□□□□□ -0.19
COL4A1-201ENST00000375820 DGUOKQ16854 277 aa13.88□□□□□ -0.19
COL4A1-201ENST00000375820 SLC27A1Q6PCB7 646 aa13.88□□□□□ -0.19
COL4A1-201ENST00000375820 SPATA31D4Q6ZUB0 917 aa13.88□□□□□ -0.19
COL4A1-201ENST00000375820 SMYD1Q8NB12 490 aa13.88□□□□□ -0.19
COL4A1-201ENST00000375820 COPS5Q92905 334 aa13.88□□□□□ -0.19
COL4A1-201ENST00000375820 TPRKBQ9Y3C4 175 aa13.88□□□□□ -0.19
COL4A1-201ENST00000375820 PRG2P13727 222 aa13.88□□□□□ -0.19
COL4A1-201ENST00000375820 SCNN1GP51170 649 aa13.88□□□□□ -0.19
COL4A1-201ENST00000375820 THOP1P52888 689 aa13.88□□□□□ -0.19
COL4A1-201ENST00000375820 IL2P60568 153 aa13.88□□□□□ -0.19
COL4A1-201ENST00000375820 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
COL4A1-201ENST00000375820 RBM23Q86U06 439 aaKnown RBP13.88□□□□□ -0.19
COL4A1-201ENST00000375820 SERPINB11Q96P15 392 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms