RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 CASTOR2A6NHX0 329 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 DHX15O43143 795 aaKnown RBP17.05■□□□□ 0.32
VARS-215ENST00000375663 CSH1P0DML2 217 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 CSH2P0DML3 217 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 NPR3P17342 541 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 MAP3K10Q02779 954 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 GAD2Q05329 585 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 FAM98BQ52LJ0 330 aaKnown RBP17.05■□□□□ 0.32
VARS-215ENST00000375663 GNASQ5JWF2 1037 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 CACHD1Q5VU97 1274 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 ADCY4Q8NFM4 1077 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 ACSS2Q9NR19 701 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 A0A087X1B8 175 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 FARP2O94887 1054 aaPredicted RBP17.05■□□□□ 0.32
VARS-215ENST00000375663 OR1G1P47890 313 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 RAB10P61026 200 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 TCEAL1Q15170 157 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 ZNF410Q86VK4 478 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 DNAJB3Q8WWF6 145 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 LENG1Q96BZ8 264 aaPredicted RBP17.05■□□□□ 0.32
VARS-215ENST00000375663 NPAS2Q99743 824 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 LRRC42Q9Y546 428 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 RAD54BQ9Y620 910 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 CCL15-CCL14A0A0B4J2E2 113 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 PTPN1P18031 435 aaKnown RBP17.05■□□□□ 0.32
VARS-215ENST00000375663 ARF4P18085 180 aaPredicted RBP17.05■□□□□ 0.32
VARS-215ENST00000375663 IL1R2P27930 398 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 CCL15Q16663 113 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 DSELQ8IZU8 1212 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 CENPLQ8N0S6 344 aaPredicted RBP17.05■□□□□ 0.32
VARS-215ENST00000375663 EBF3Q9H4W6 596 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 FAM32AQ9Y421 112 aaKnown RBP17.05■□□□□ 0.32
VARS-215ENST00000375663 C5P01031 1676 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 LTA4HP09960 611 aaKnown RBP17.05■□□□□ 0.32
VARS-215ENST00000375663 TSPAN8P19075 237 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 EFEMP1Q12805 493 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 SQLEQ14534 574 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 HSDL1Q3SXM5 330 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 CERCAMQ5T4B2 595 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 PLPPR4Q7Z2D5 763 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 RIOX2Q8IUF8 465 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 FNDC5Q8NAU1 212 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 TMEM216Q9P0N5 145 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 ATXN10Q9UBB4 475 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 FBXO5Q9UKT4 447 aa17.05■□□□□ 0.32
VARS-215ENST00000375663 C17orf102A2RUQ5 167 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 MAP3K13O43283 966 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 UGT1A9O60656 530 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 UGT3A1Q6NUS8 523 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 SIAH1Q8IUQ4 282 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 FAM126BQ8IXS8 530 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 RDH11Q8TC12 318 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 MAGEE2Q8TD90 523 aaPredicted RBP17.04■□□□□ 0.32
VARS-215ENST00000375663 DDX1Q92499 740 aaKnown RBP17.04■□□□□ 0.32
VARS-215ENST00000375663 OSBPL11Q9BXB4 747 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 ADAM7Q9H2U9 754 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 UGT1A7Q9HAW7 530 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 UGT1A10Q9HAW8 530 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 UGT1A8Q9HAW9 530 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 POMPQ9Y244 141 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 SYNCRIPO60506 623 aaKnown RBP17.04■□□□□ 0.32
VARS-215ENST00000375663 MSS51Q4VC12 460 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 FAM182AQ5T1J6 154 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 RHBDF2Q6PJF5 856 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 RNF217Q8TC41 542 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 COMMD8Q9NX08 183 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 RSL24D1Q9UHA3 163 aaKnown RBP17.04■□□□□ 0.32
VARS-215ENST00000375663 GNEQ9Y223 722 aaKnown RBP17.04■□□□□ 0.32
VARS-215ENST00000375663 GOLGA4Q13439 2230 aaKnown RBP17.04■□□□□ 0.32
VARS-215ENST00000375663 C2CD4BA6NLJ0 364 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 PSMD7P51665 324 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 ZNF135P52742 658 aaPredicted RBP17.04■□□□□ 0.32
VARS-215ENST00000375663 PPP1R15BQ5SWA1 713 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 WSCD1Q658N2 575 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 PMF1Q6P1K2 205 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 PCDH19Q8TAB3 1148 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 MRPL57Q9BQC6 102 aaKnown RBP17.04■□□□□ 0.32
VARS-215ENST00000375663 MRPL45Q9BRJ2 306 aaKnown RBP17.04■□□□□ 0.32
VARS-215ENST00000375663 KLHL25Q9H0H3 589 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 POLG2Q9UHN1 485 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 DSEQ9UL01 958 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 SLC8A2Q9UPR5 921 aa17.04■□□□□ 0.32
VARS-215ENST00000375663 CCDC154A6NI56 674 aa17.03■□□□□ 0.32
VARS-215ENST00000375663 CRTAMO95727 393 aa17.03■□□□□ 0.32
VARS-215ENST00000375663 TFEBP19484 476 aa17.03■□□□□ 0.32
VARS-215ENST00000375663 TTKP33981 857 aa17.03■□□□□ 0.32
VARS-215ENST00000375663 DEFA1P59665 94 aa17.03■□□□□ 0.32
VARS-215ENST00000375663 DEFA3P59666 94 aa17.03■□□□□ 0.32
VARS-215ENST00000375663 RNF219Q5W0B1 726 aaPredicted RBP17.03■□□□□ 0.32
VARS-215ENST00000375663 NIPA2Q8N8Q9 360 aa17.03■□□□□ 0.32
VARS-215ENST00000375663 B3GALNT2Q8NCR0 500 aa17.03■□□□□ 0.32
VARS-215ENST00000375663 FIG4Q92562 907 aa17.03■□□□□ 0.32
VARS-215ENST00000375663 SMARCD1Q96GM5 515 aa17.03■□□□□ 0.32
VARS-215ENST00000375663 TXLNGYQ9BZA5 131 aa17.03■□□□□ 0.32
VARS-215ENST00000375663 RHOJQ9H4E5 214 aa17.03■□□□□ 0.32
VARS-215ENST00000375663 PNPLA3Q9NST1 481 aa17.03■□□□□ 0.32
VARS-215ENST00000375663 DNAJC28Q9NX36 388 aa17.03■□□□□ 0.32
VARS-215ENST00000375663 ZSCAN9O15535 394 aaPredicted RBP17.03■□□□□ 0.32
VARS-215ENST00000375663 LBPP18428 481 aa17.03■□□□□ 0.32
VARS-215ENST00000375663 AQP4P55087 323 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms