RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 CKBP12277 381 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 SFNP31947 248 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 MPLP40238 635 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 TNNT3P45378 269 aaPredicted RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 QARSP47897 775 aaKnown RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 CLK3P49761 638 aaKnown RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 RARRES1P49788 294 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 NEK2P51955 445 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 JAK3P52333 1124 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 NAP1L1P55209 391 aaKnown RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 CTXN1P60606 82 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 TNNC1P63316 161 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 UBXN2AP68543 259 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 MYL7Q01449 175 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 ENPEPQ07075 957 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 BFSP1Q12934 665 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 ITGB3BPQ13352 177 aaPredicted RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 KIF22Q14807 665 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 RPS6KA1Q15418 735 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 ZC2HC1CQ53FD0 456 aaPredicted RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 XRRA1Q6P2D8 792 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 ALKBH5Q6P6C2 394 aaKnown RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 SLC30A10Q6XR72 485 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 H2AFVQ71UI9 128 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 INTS8Q75QN2 995 aaKnown RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 MIGA2Q7L4E1 593 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 ADGRG3Q86Y34 549 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 IFT20Q8IY31 132 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 C4orf19Q8IY42 314 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 SYCE1Q8N0S2 351 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 MREGQ8N565 214 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 ANKRD13CQ8N6S4 541 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 EIF1ADQ8N9N8 165 aaKnown RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 NLGN4YQ8NFZ3 816 aaPredicted RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 IL31RAQ8NI17 732 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 SLC30A5Q8TAD4 765 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 ACTRT1Q8TDG2 376 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 NRG4Q8WWG1 115 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.09□□□□□ -1.59
USP48-202ENST00000374730 HVCN1Q96D96 273 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 SLC39A13Q96H72 371 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 ZNF764Q96H86 408 aaPredicted RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 BBC3Q96PG8 261 aaPredicted RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 SLC2A13Q96QE2 648 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 IWS1Q96ST2 819 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 LRRC1Q9BTT6 524 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.09□□□□□ -1.59
USP48-202ENST00000374730 PACSIN1Q9BY11 444 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 INTS2Q9H0H0 1204 aaKnown RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 C11orf54Q9H0W9 315 aaPredicted RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 ARNT2Q9HBZ2 717 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 ZCCHC17Q9NP64 241 aaKnown RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 MYOZ2Q9NPC6 264 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 GDF3Q9NR23 364 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 ANKEF1Q9NU02 776 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 TBC1D22BQ9NU19 505 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 TBCCD1Q9NVR7 557 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 CALCOCO1Q9P1Z2 691 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 LARSQ9P2J5 1176 aaKnown RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 TESQ9UGI8 421 aaKnown RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 ADAM21Q9UKJ8 722 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 ZHX1Q9UKY1 873 aaPredicted RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 RUVBL1Q9Y265 456 aaKnown RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 STXBP5LQ9Y2K9 1186 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 FRMD4BQ9Y2L6 1034 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 SPEF1Q9Y4P9 236 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 PFASO15067 1338 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 ASTN2O75129 1339 aaPredicted RBP5.08□□□□□ -1.6
USP48-202ENST00000374730 GOLGA6BA6NDN3 693 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 MYADML2A6NDP7 307 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 GOLGA8KD6RF30 607 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 CCDC188H7C350 402 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 EXOC3O60645 756 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 CTNND1O60716 968 aaKnown RBP5.08□□□□□ -1.6
USP48-202ENST00000374730 PRSS23O95084 383 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 FTCDO95954 541 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 KRT13P13646 458 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 VCAM1P19320 739 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 YY1P25490 414 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 CXCR5P32302 372 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 CYP2J2P51589 502 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 GUCY2FP51841 1108 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 OAZ1P54368 228 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 HADHBP55084 474 aaKnown RBP5.08□□□□□ -1.6
USP48-202ENST00000374730 RPS6P62753 249 aaKnown RBP5.08□□□□□ -1.6
USP48-202ENST00000374730 HSD11B2P80365 405 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 GTF2BQ00403 316 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 MTMR1Q13613 665 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 COG2Q14746 738 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 DRAP1Q14919 205 aaPredicted RBP5.08□□□□□ -1.6
USP48-202ENST00000374730 CYP2A13Q16696 494 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 CBWD6Q4V339 395 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 EPC2Q52LR7 807 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 CBWD3Q5JTY5 395 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 CBWD5Q5RIA9 395 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 ALS2CLQ60I27 953 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 NXNQ6DKJ4 435 aa5.08□□□□□ -1.6
USP48-202ENST00000374730 RAVER1Q8IY67 606 aaKnown RBP5.08□□□□□ -1.6
USP48-202ENST00000374730 SYCP3Q8IZU3 236 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms