RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 TEX47Q8TBZ9 253 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 KLHL32Q96NJ5 620 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 PPP2R3BQ9Y5P8 575 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 ARFIP1P53367 373 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 ZNHIT3Q15649 155 aaPredicted RBP8.49□□□□□ -1.05
HSPG2-203ENST00000374695 DENND5AQ6IQ26 1287 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 MAB21L3Q8N8X9 362 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 TLR8Q9NR97 1041 aaKnown RBP8.49□□□□□ -1.05
HSPG2-203ENST00000374695 TTLL13PA6NNM8 815 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 TLX1P31314 330 aaPredicted RBP8.49□□□□□ -1.05
HSPG2-203ENST00000374695 S100A3P33764 101 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 MAPK9P45984 424 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 RPL14P50914 215 aaKnown RBP8.49□□□□□ -1.05
HSPG2-203ENST00000374695 EPB41L1Q9H4G0 881 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 GMPPBQ9Y5P6 360 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 USP42Q9H9J4 1324 aaKnown RBP8.49□□□□□ -1.05
HSPG2-203ENST00000374695 MRASO14807 208 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 ACADMP11310 421 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 SUN5Q8TC36 379 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 IRX2Q9BZI1 471 aaPredicted RBP8.49□□□□□ -1.05
HSPG2-203ENST00000374695 OR14I1A6ND48 311 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 PP2D1A8MPX8 630 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 CCNT2O60583 730 aaKnown RBP8.49□□□□□ -1.05
HSPG2-203ENST00000374695 MBL2P11226 248 aaPredicted RBP8.49□□□□□ -1.05
HSPG2-203ENST00000374695 MAGEA2P43356 314 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 SKIV2LQ15477 1246 aaKnown RBP8.49□□□□□ -1.05
HSPG2-203ENST00000374695 ZNF621Q6ZSS3 439 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 MREGQ8N565 214 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 ZNF512BQ96KM6 892 aaPredicted RBP8.49□□□□□ -1.05
HSPG2-203ENST00000374695 SERPINA1P01009 418 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 KLRC1P26715 233 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 FAM172AQ8WUF8 416 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 ZHX1-C8orf76Q96EF9 292 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 FMN2Q9NZ56 1722 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 CDK16Q00536 496 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 GPSM1Q86YR5 675 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 TEFMQ96QE5 360 aaKnown RBP8.49□□□□□ -1.05
HSPG2-203ENST00000374695 ACOX2Q99424 681 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 GJB4Q9NTQ9 266 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 GGA3Q9NZ52 723 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 VPS4AQ9UN37 437 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 OGTO15294 1046 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 SPP2Q13103 211 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 ARCQ7LC44 396 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 SRBD1Q8N5C6 995 aaKnown RBP8.49□□□□□ -1.05
HSPG2-203ENST00000374695 MEIOBQ8N635 442 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 POC5Q8NA72 575 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 TRIM10Q9UDY6 481 aa8.49□□□□□ -1.05
HSPG2-203ENST00000374695 GSG1L2A8MUP6 293 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 MAGEC1O60732 1142 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 SLC25A12O75746 678 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 SLC25A27O95847 323 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 HKDC1Q2TB90 917 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 GLRA4Q5JXX5 417 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 RAD9BQ6WBX8 426 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 CLHC1Q8NHS4 586 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 AIFM2Q9BRQ8 373 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 FAIM2Q9BWQ8 316 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 NECTIN3Q9NQS3 549 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 ASTN2O75129 1339 aaPredicted RBP8.48□□□□□ -1.05
HSPG2-203ENST00000374695 PPIBP23284 216 aaKnown RBP8.48□□□□□ -1.05
HSPG2-203ENST00000374695 CYP2F1P24903 491 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 ZFP69Q49AA0 526 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 EFCAB12Q6NXP0 572 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 MOXD1Q6UVY6 613 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 GPALPP1Q8IXQ4 340 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 CD101Q93033 1021 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 CLK4Q9HAZ1 481 aaKnown RBP8.48□□□□□ -1.05
HSPG2-203ENST00000374695 CATSPERZQ9NTU4 200 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 ARHGEF17Q96PE2 2063 aaPredicted RBP8.48□□□□□ -1.05
HSPG2-203ENST00000374695 SVILO95425 2214 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 ARHGEF33A8MVX0 844 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 ITGA3P26006 1051 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 PON1P27169 355 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 NAMPTP43490 491 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 ST3GAL1Q11201 340 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 PEX6Q13608 980 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 DGCR6Q14129 220 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 LZTR1Q8N653 840 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 VPS28Q9UK41 221 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.48□□□□□ -1.056e-6■□□□□ 8.7
HSPG2-203ENST00000374695 PPLO60437 1756 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.48□□□□□ -1.05
HSPG2-203ENST00000374695 GNB5O14775 395 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 PAX3P23760 479 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 ENPEPQ07075 957 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.48□□□□□ -1.05
HSPG2-203ENST00000374695 CARNMT1Q8N4J0 409 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 TMIEQ8NEW7 156 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 TCP10LQ8TDR4 215 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 PRCCQ92733 491 aaPredicted RBP8.48□□□□□ -1.05
HSPG2-203ENST00000374695 DCLK3Q9C098 648 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 MTMR4Q9NYA4 1195 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 ACTL7BQ9Y614 415 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 MYO3AQ8NEV4 1616 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 RIPK2O43353 540 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 ACSL4O60488 711 aa8.48□□□□□ -1.05
HSPG2-203ENST00000374695 EIF2S3LQ2VIR3 472 aaKnown RBP8.48□□□□□ -1.05
HSPG2-203ENST00000374695 AHCYL2Q96HN2 611 aaKnown RBP8.48□□□□□ -1.05
HSPG2-203ENST00000374695 C12orf66Q96MD2 445 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms