RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 PDPK1O15530 556 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 UFL1O94874 794 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 ATG7O95352 703 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 HLA-DRAP01903 254 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 PCSK6P29122 969 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 IDH3AP50213 366 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 SNAP25P60880 206 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 MYBPC1Q00872 1141 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 IKBKEQ14164 716 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 ZNF699Q32M78 642 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 OR8H3Q8N146 312 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 CAMKK1Q8N5S9 505 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 C7orf31Q8N865 590 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 ITFG1Q8TB96 612 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 CHURC1Q8WUH1 139 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 CDK5RAP1Q96SZ6 601 aaKnown RBP10.39□□□□□ -0.75
CD28-202ENST00000374481 CBWD1Q9BRT8 395 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 PI4KBQ9UBF8 816 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 ACOT9Q9Y305 439 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 CLTCQ00610 1675 aaKnown RBP10.39□□□□□ -0.75
CD28-202ENST00000374481 SF3B1O75533 1304 aaKnown RBP eCLIP10.39□□□□□ -0.75
CD28-202ENST00000374481 KATNA1O75449 491 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 FAM155BO75949 473 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 ITGAVP06756 1048 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 CRHR1P34998 444 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 RAB25P57735 213 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 PSMC6P62333 389 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 POU5F1Q01860 360 aaKnown RBP10.39□□□□□ -0.75
CD28-202ENST00000374481 NSUN2Q08J23 767 aaKnown RBP eCLIP10.39□□□□□ -0.75
CD28-202ENST00000374481 BTG3Q14201 252 aaPredicted RBP10.39□□□□□ -0.75
CD28-202ENST00000374481 ANGPT1Q15389 498 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 COLEC12Q5KU26 742 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 GPAT2Q6NUI2 795 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 ANGPTL8Q6UXH0 198 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 ZBTB8OSQ8IWT0 167 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 LRRC17Q8N6Y2 441 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 CDC26Q8NHZ8 85 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 TAS1R2Q8TE23 839 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 CENPNQ96H22 339 aaPredicted RBP10.39□□□□□ -0.75
CD28-202ENST00000374481 RMDN3Q96TC7 470 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 SPRTNQ9H040 489 aaPredicted RBP10.39□□□□□ -0.75
CD28-202ENST00000374481 ADPRHL2Q9NX46 363 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 PAQR5Q9NXK6 330 aaPredicted RBP10.39□□□□□ -0.75
CD28-202ENST00000374481 RAP2CQ9Y3L5 183 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 SLC22A1O15245 554 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 PAPSS1O43252 624 aaPredicted RBP10.39□□□□□ -0.75
CD28-202ENST00000374481 ICMTO60725 284 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 RFPL2O75678 378 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 ARHGAP17Q68EM7 881 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 SPESP1Q6UW49 350 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 RASSF6Q6ZTQ3 369 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 TNS4Q8IZW8 715 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 DCPSQ96C86 337 aaKnown RBP10.39□□□□□ -0.75
CD28-202ENST00000374481 MED30Q96HR3 178 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 KCTD10Q9H3F6 313 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 ZNF395Q9H8N7 513 aaPredicted RBP10.39□□□□□ -0.75
CD28-202ENST00000374481 POU2F3Q9UKI9 436 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 SIGLEC1Q9BZZ2 1709 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 OR6C70A6NIJ9 312 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 TYROBPO43914 113 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 OSTNP61366 133 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 BNIP2Q12982 314 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 IL18R1Q13478 541 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 NAB1Q13506 487 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 UGT3A1Q6NUS8 523 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 KIAA0408Q6ZU52 694 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 SMG8Q8ND04 991 aaKnown RBP10.39□□□□□ -0.75
CD28-202ENST00000374481 CHPT1Q8WUD6 406 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 CCDC17Q96LX7 622 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 SLITRK1Q96PX8 696 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 MMP19Q99542 508 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 ZC3H12CQ9C0D7 883 aaKnown RBP10.39□□□□□ -0.75
CD28-202ENST00000374481 ZNF556Q9HAH1 456 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 XPNPEP3Q9NQH7 507 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 GMIPQ9P107 970 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 OGDHLQ9ULD0 1010 aa10.39□□□□□ -0.75
CD28-202ENST00000374481 INO80B-WBP1J3KQ70 363 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 NRP2O60462 931 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 TOP3BO95985 862 aaKnown RBP10.38□□□□□ -0.75
CD28-202ENST00000374481 FUCA1P04066 466 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 LTKP29376 864 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 NFATC3Q12968 1075 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 FNBP1LQ5T0N5 605 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 ZBTB33Q86T24 672 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 CBWD2Q8IUF1 395 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 OR6P1Q8NGX9 317 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 CCDC126Q96EE4 140 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 APBA2Q99767 749 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 RBAKQ9NYW8 714 aaPredicted RBP10.38□□□□□ -0.75
CD28-202ENST00000374481 PDE10AQ9Y233 779 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 TBX22Q9Y458 520 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 MTF2Q9Y483 593 aaPredicted RBP10.38□□□□□ -0.75
CD28-202ENST00000374481 MPOP05164 745 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 SLC7A1P30825 629 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 TMBIM6P55061 237 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 RUNDC3AQ59EK9 446 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 GARNL3Q5VVW2 1013 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 DENND1AQ8TEH3 1009 aa10.38□□□□□ -0.75
CD28-202ENST00000374481 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.38□□□□□ -0.75
CD28-202ENST00000374481 SH2D3AQ9BRG2 576 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms