RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 GJA1P17302 382 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 ITGB6P18564 788 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 EPHA3P29320 983 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 OR1E1P30953 314 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 PGM1P36871 562 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 RASSF2P50749 326 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 ACLYP53396 1101 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 DSC2Q02487 901 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 ALFQ53S48 1182 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 BZW1Q7L1Q6 419 aaKnown RBP11□□□□□ -0.65
CXCL12-203ENST00000374429 SDCCAG8Q86SQ7 713 aaPredicted RBP11□□□□□ -0.65
CXCL12-203ENST00000374429 ZNF598Q86UK7 904 aaKnown RBP11□□□□□ -0.65
CXCL12-203ENST00000374429 NT5DC4Q86YG4 428 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 SERBP1Q8NC51 408 aaKnown RBP eCLIP11□□□□□ -0.65
CXCL12-203ENST00000374429 PSMG2Q969U7 264 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 VRTNQ9H8Y1 702 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 TXLNGQ9NUQ3 528 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 NKX1-2Q9UD57 310 aaPredicted RBP11□□□□□ -0.65
CXCL12-203ENST00000374429 IPO11Q9UI26 975 aaKnown RBP11□□□□□ -0.65
CXCL12-203ENST00000374429 CHD7Q9P2D1 2997 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 BCLAF3A2AJT9 711 aaKnown RBP11□□□□□ -0.65
CXCL12-203ENST00000374429 C5orf60A6NFR6 353 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 TMEM233B4DJY2 109 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 PTPN9P43378 593 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 PRAMEP78395 509 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 KPNB1Q14974 876 aaKnown RBP11□□□□□ -0.65
CXCL12-203ENST00000374429 FSTL4Q6MZW2 842 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 CLNKQ7Z7G1 428 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 ZNF467Q7Z7K2 595 aaPredicted RBP11□□□□□ -0.65
CXCL12-203ENST00000374429 TOP6BLQ8N6T0 577 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 SOCS4Q8WXH5 440 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 FAM96AQ9H5X1 160 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 XAB2Q9HCS7 855 aaKnown RBP11□□□□□ -0.65
CXCL12-203ENST00000374429 SNX15Q9NRS6 342 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 SENP1Q9P0U3 644 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 TMEM88BA6NKF7 163 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 AXIN1O15169 862 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 RFPL1O75677 317 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 ALDOAP04075 364 aaKnown RBP11□□□□□ -0.65
CXCL12-203ENST00000374429 ABHD2P08910 425 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 AXLP30530 894 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 SERPINB6P35237 376 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 CDH13P55290 713 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 SPDYCQ5MJ68 293 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 TMEM198Q66K66 360 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 ZNF534Q76KX8 674 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 TAS1R1Q7RTX1 841 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 USP13Q92995 863 aaPredicted RBP11□□□□□ -0.65
CXCL12-203ENST00000374429 QKIQ96PU8 341 aaKnown RBP eCLIP11□□□□□ -0.65
CXCL12-203ENST00000374429 FOXP3Q9BZS1 431 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 OSER1Q9NX31 292 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 FBXW11Q9UKB1 542 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 PCDHB7Q9Y5E2 793 aa11□□□□□ -0.65
CXCL12-203ENST00000374429 GSTA1P08263 222 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 GSTA2P09210 222 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 HAPLN1P10915 354 aaPredicted RBP10.99□□□□□ -0.65
CXCL12-203ENST00000374429 KCNE1P15382 129 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 CYP2C18P33260 490 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 OR1D2P34982 312 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 MAGEA10P43363 369 aaPredicted RBP10.99□□□□□ -0.65
CXCL12-203ENST00000374429 SLC1A6P48664 564 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 POLE2P56282 527 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 SLC10A7Q0GE19 358 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 TUSC3Q13454 348 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 CUL3Q13618 768 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 GRM3Q14832 879 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 INTS6LQ5JSJ4 861 aaKnown RBP10.99□□□□□ -0.65
CXCL12-203ENST00000374429 STRADAQ7RTN6 431 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
CXCL12-203ENST00000374429 WDR75Q8IWA0 830 aaKnown RBP10.99□□□□□ -0.65
CXCL12-203ENST00000374429 RIBC1Q8N443 379 aaPredicted RBP10.99□□□□□ -0.65
CXCL12-203ENST00000374429 KLHDC9Q8NEP7 349 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 ZSCAN18Q8TBC5 510 aaPredicted RBP10.99□□□□□ -0.65
CXCL12-203ENST00000374429 DENND1AQ8TEH3 1009 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 GDAP2Q9NXN4 497 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 FAM50BQ9Y247 325 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 PLLPQ9Y342 182 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 WDR81Q562E7 1941 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 ZBBXA8MT70 800 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 DAB1O75553 588 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 UNC5CO95185 931 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 RALBP11234 206 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 CKBP12277 381 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 CD1EP15812 388 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 ACVRL1P37023 503 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 RPS24P62847 133 aaKnown RBP10.99□□□□□ -0.65
CXCL12-203ENST00000374429 SREBF2Q12772 1141 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 MUM1Q2TAK8 710 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 OTUD1Q5VV17 481 aaPredicted RBP10.99□□□□□ -0.65
CXCL12-203ENST00000374429 CES4AQ5XG92 561 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 SCIMPQ6UWF3 145 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 PSTKQ8IV42 348 aaKnown RBP10.99□□□□□ -0.65
CXCL12-203ENST00000374429 DENND1CQ8IV53 801 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 MFN1Q8IWA4 741 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 CNTD1Q8N815 330 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 ANKLE1Q8NAG6 615 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 OR52K2Q8NGK3 314 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 HBEGFQ99075 208 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 TM6SF2Q9BZW4 377 aa10.99□□□□□ -0.65
CXCL12-203ENST00000374429 TBC1D13Q9NVG8 400 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms