RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 ATP11CQ8NB49 1132 aa12.86□□□□□ -0.35
SNCG-202ENST00000372017 RAPGEF5Q92565 580 aa12.86□□□□□ -0.35
SNCG-202ENST00000372017 C2orf49Q9BVC5 232 aaPredicted RBP12.86□□□□□ -0.35
SNCG-202ENST00000372017 RSPH9Q9H1X1 276 aaPredicted RBP12.86□□□□□ -0.35
SNCG-202ENST00000372017 MAGEH1Q9H213 219 aa12.86□□□□□ -0.35
SNCG-202ENST00000372017 CATSPERBQ9H7T0 1116 aa12.86□□□□□ -0.35
SNCG-202ENST00000372017 ITM2CQ9NQX7 267 aa12.86□□□□□ -0.35
SNCG-202ENST00000372017 USP36Q9P275 1121 aaKnown RBP12.86□□□□□ -0.35
SNCG-202ENST00000372017 TRIM10Q9UDY6 481 aa12.86□□□□□ -0.35
SNCG-202ENST00000372017 SARDHQ9UL12 918 aa12.86□□□□□ -0.35
SNCG-202ENST00000372017 CYP8B1Q9UNU6 501 aa12.86□□□□□ -0.35
SNCG-202ENST00000372017 SMG5Q9UPR3 1016 aaKnown RBP12.86□□□□□ -0.35
SNCG-202ENST00000372017 FCF1Q9Y324 198 aaKnown RBP12.86□□□□□ -0.35
SNCG-202ENST00000372017 LAMA1P25391 3075 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 SPAG17Q6Q759 2223 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 A0A0A6YYK5 440 aaPredicted RBP12.85□□□□□ -0.35
SNCG-202ENST00000372017 EDDM13A0A1B0GTR0 161 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 GOLGA6L3A6NEY3 463 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 J3KR12 359 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 LMNAP02545 664 aaKnown RBP12.85□□□□□ -0.35
SNCG-202ENST00000372017 CTSLP07711 333 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 COMTP21964 271 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 NOP2P46087 812 aaKnown RBP12.85□□□□□ -0.35
SNCG-202ENST00000372017 SERPINH1P50454 418 aaKnown RBP12.85□□□□□ -0.35
SNCG-202ENST00000372017 PAPOLAP51003 745 aaKnown RBP12.85□□□□□ -0.35
SNCG-202ENST00000372017 TPMTP51580 245 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 VAV2P52735 878 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 SERINC3Q13530 473 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 E2F5Q15329 346 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 HADHQ16836 314 aaKnown RBP12.85□□□□□ -0.35
SNCG-202ENST00000372017 ACCSLQ4AC99 568 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 USP39Q53GS9 565 aaKnown RBP12.85□□□□□ -0.35
SNCG-202ENST00000372017 PRR23BQ6ZRT6 265 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 METTL3Q86U44 580 aaKnown RBP12.85□□□□□ -0.35
SNCG-202ENST00000372017 DCLK2Q8N568 766 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 CHST14Q8NCH0 376 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 OR2A12Q8NGT7 310 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 TPCN2Q8NHX9 752 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 SIPA1Q96FS4 1042 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 ZC3H10Q96K80 434 aaKnown RBP12.85□□□□□ -0.35
SNCG-202ENST00000372017 PPP1R9BQ96SB3 815 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 TNKS2Q9H2K2 1166 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 PDFQ9HBH1 243 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 SERGEFQ9UGK8 458 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 ALG6Q9Y672 507 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 NUMA1Q14980 2115 aa12.85□□□□□ -0.35
SNCG-202ENST00000372017 DNAH14Q0VDD8 3507 aa12.84□□□□□ -0.35
SNCG-202ENST00000372017 C3orf70A6NLC5 250 aaPredicted RBP12.84□□□□□ -0.35
SNCG-202ENST00000372017 H3BRJ5 948 aa12.84□□□□□ -0.35
SNCG-202ENST00000372017 DAPK3O43293 454 aa12.84□□□□□ -0.35
SNCG-202ENST00000372017 KDELR1P24390 212 aa12.84□□□□□ -0.35
SNCG-202ENST00000372017 MARCKSL1P49006 195 aa12.84□□□□□ -0.35
SNCG-202ENST00000372017 NDST2P52849 883 aa12.84□□□□□ -0.35
SNCG-202ENST00000372017 GSDMDP57764 484 aa12.84□□□□□ -0.35
SNCG-202ENST00000372017 YBEYP58557 167 aaPredicted RBP12.84□□□□□ -0.35
SNCG-202ENST00000372017 CCZ1BP86790 482 aa12.84□□□□□ -0.35
SNCG-202ENST00000372017 CCZ1P86791 482 aaPredicted RBP12.84□□□□□ -0.35
SNCG-202ENST00000372017 PARP15Q460N3 678 aa12.84□□□□□ -0.35
SNCG-202ENST00000372017 C22orf39Q6P5X5 142 aa12.84□□□□□ -0.35
SNCG-202ENST00000372017 CEP68Q76N32 757 aa12.84□□□□□ -0.35
SNCG-202ENST00000372017 MMAAQ8IVH4 418 aaKnown RBP12.84□□□□□ -0.35
SNCG-202ENST00000372017 LRRC8AQ8IWT6 810 aa12.84□□□□□ -0.35
SNCG-202ENST00000372017 KIAA2013Q8IYS2 634 aa12.84□□□□□ -0.35
SNCG-202ENST00000372017 DEFB119Q8N690 84 aa12.84□□□□□ -0.35
SNCG-202ENST00000372017 PCDH19Q8TAB3 1148 aa12.84□□□□□ -0.35
SNCG-202ENST00000372017 PRCCQ92733 491 aaPredicted RBP12.84□□□□□ -0.35
SNCG-202ENST00000372017 FAF2Q96CS3 445 aa12.84□□□□□ -0.35
SNCG-202ENST00000372017 EP300Q09472 2414 aaPredicted RBP12.84□□□□□ -0.35
SNCG-202ENST00000372017 GPR179Q6PRD1 2367 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 BTNL10A8MVZ5 291 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 PLK4O00444 970 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 MID1O15344 667 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 BNIP3LO60238 219 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 IGLV3-19P01714 112 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 TNNT1P13805 278 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 NNMTP40261 264 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 ARL4AP40617 200 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 ZNF135P52742 658 aaPredicted RBP12.83□□□□□ -0.36
SNCG-202ENST00000372017 KRT81Q14533 505 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 CYTH1Q15438 398 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 CST6Q15828 149 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 ANKRD20A8PQ5CZ79 823 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 PMS2CLQ68D20 193 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 NCBP2-AS2Q69YL0 99 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 RETSATQ6NUM9 610 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 DGLUCYQ7Z3D6 616 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 SLC41A1Q8IVJ1 513 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 TMEFF1Q8IYR6 380 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 AADATQ8N5Z0 425 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 PQLC3Q8N755 202 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 KCTD6Q8NC69 237 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 SEMA4AQ9H3S1 761 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 WSB2Q9NYS7 404 aaPredicted RBP12.83□□□□□ -0.36
SNCG-202ENST00000372017 LCMT1Q9UIC8 334 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 ADGRG1Q9Y653 693 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 SHROOM3Q8TF72 1996 aa12.83□□□□□ -0.36
SNCG-202ENST00000372017 DFFAO00273 331 aa12.82□□□□□ -0.36
SNCG-202ENST00000372017 MCF2LO15068 1137 aa12.82□□□□□ -0.36
SNCG-202ENST00000372017 PRAMEF11O60813 436 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms