RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 HERC6Q8IVU3 1022 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 MCOLN2Q8IZK6 566 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 FUKQ8N0W3 1084 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 SLC39A11Q8N1S5 342 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 NKAPQ8N5F7 415 aaKnown RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 COLGALT1Q8NBJ5 622 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 C1orf131Q8NDD1 294 aaKnown RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 OR10T2Q8NGX3 314 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 SLC2A14Q8TDB8 520 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 IGSF21Q96ID5 467 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 MAP6Q96JE9 813 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 SLC2A13Q96QE2 648 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 HNRNPABQ99729 332 aaKnown RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 SYT15Q9BQS2 421 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 PLCD4Q9BRC7 762 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 THAP2Q9H0W7 228 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 TMEM30AQ9NV96 361 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 GTF3C4Q9UKN8 822 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 GUCA1BQ9UMX6 200 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 COG5Q9UP83 839 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 INVSQ9Y283 1065 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 SLC4A7Q9Y6M7 1214 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 NCANO14594 1321 aa3.72□□□□□ -1.81
MCF2-202ENST00000370573 TNRC18O15417 2968 aaPredicted RBP3.72□□□□□ -1.81
MCF2-202ENST00000370573 TCRBV5S1A1TA0A578 114 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 MACROD2A1Z1Q3 448 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 BTNL10A8MVZ5 291 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 GRXCR1A8MXD5 290 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 M0QYV0 167 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 ETV2O00321 342 aaPredicted RBP3.71□□□□□ -1.81
MCF2-202ENST00000370573 DVL2O14641 736 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 ADAM12O43184 909 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 MED7O43513 233 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 BEST1O76090 585 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 IPO7O95373 1038 aaKnown RBP3.71□□□□□ -1.81
MCF2-202ENST00000370573 MOCS3O95396 460 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 LSM8O95777 96 aaKnown RBP3.71□□□□□ -1.81
MCF2-202ENST00000370573 CYP1A2P05177 515 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 OR4Q2P0C623 313 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 IFNGR1P15260 489 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 ABCB4P21439 1286 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 MMP8P22894 467 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 ADORA2BP29275 332 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 ALDH7A1P49419 539 aaKnown RBP3.71□□□□□ -1.81
MCF2-202ENST00000370573 RGS7P49802 495 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 CACNA2D1P54289 1103 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 CHRNEQ04844 493 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 KIF5AQ12840 1032 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 ACAP2Q15057 778 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 SHHQ15465 462 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 PTPN20Q4JDL3 420 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 RTP2Q5QGT7 225 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 ATAT1Q5SQI0 421 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 PMF1Q6P1K2 205 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 FUT10Q6P4F1 479 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 PSRC1Q6PGN9 363 aaPredicted RBP3.71□□□□□ -1.81
MCF2-202ENST00000370573 ATG14Q6ZNE5 492 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 ERICH1Q86X53 443 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 METTL23Q86XA0 190 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 RNF168Q8IYW5 571 aaPredicted RBP3.71□□□□□ -1.81
MCF2-202ENST00000370573 LILRA2Q8N149 483 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 ANKRD52Q8NB46 1076 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 B3GALNT2Q8NCR0 500 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 TMEM35BQ8NCS4 154 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 MYCBPAPQ8TBZ2 947 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 SPATA18Q8TC71 538 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 SLC35F5Q8WV83 523 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 SECISBP2LQ93073 1101 aaKnown RBP3.71□□□□□ -1.81
MCF2-202ENST00000370573 TNIP3Q96KP6 325 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 SGCZQ96LD1 299 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 C16orf45Q96MC5 204 aaPredicted RBP3.71□□□□□ -1.81
MCF2-202ENST00000370573 ZNF558Q96NG5 402 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 WDR24Q96S15 920 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 CPXM1Q96SM3 734 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 YME1L1Q96TA2 773 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 LBHD1Q9BQE6 289 aaPredicted RBP3.71□□□□□ -1.81
MCF2-202ENST00000370573 ACBD6Q9BR61 282 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 C11orf70Q9BRQ4 267 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 CCM2LQ9NUG4 571 aaPredicted RBP3.71□□□□□ -1.81
MCF2-202ENST00000370573 MYO1AQ9UBC5 1043 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 PRDM4Q9UKN5 801 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 TSPAN16Q9UKR8 245 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 DSEQ9UL01 958 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 CDH9Q9ULB4 789 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 POLHQ9Y253 713 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 YBX2Q9Y2T7 364 aaKnown RBP3.71□□□□□ -1.81
MCF2-202ENST00000370573 MRFAP1Q9Y605 127 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 SCINQ9Y6U3 715 aa3.71□□□□□ -1.81
MCF2-202ENST00000370573 ATP8B3O60423 1300 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 CHD7Q9P2D1 2997 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 MYH10P35580 1976 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 SYN3O14994 580 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 CCP110O43303 1012 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 TRAPPC3O43617 180 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 BUB1O43683 1085 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 VNN2O95498 520 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 ERBB2P04626 1255 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 MYOGP15173 224 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 VAV1P15498 845 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 RRM1P23921 792 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms