RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 MANEALQ5VSG8 457 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 FYB2Q5VWT5 728 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 CLEC20AQ6ZU45 233 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 MFSD6LQ8IWD5 586 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 GJD3Q8N144 294 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 LZTR1Q8N653 840 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 XXYLT1Q8NBI6 393 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 TTC8Q8TAM2 541 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 FGF13Q92913 245 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 TMA16Q96EY4 203 aaKnown RBP7.04□□□□□ -1.28
CSDE1-204ENST00000369530 MSANTD3Q96H12 275 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 PCED1BQ96HM7 432 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 ERGIC2Q96RQ1 377 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 SLC22A12Q96S37 553 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 ECSITQ9BQ95 431 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 ROPN1BQ9BZX4 212 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-204ENST00000369530 DRC3Q9H069 523 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 RNF38Q9H0F5 515 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 ROPN1Q9HAT0 212 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-204ENST00000369530 C12orf10Q9HB07 376 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 GPAMQ9HCL2 828 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 ZDHHC18Q9NUE0 388 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 UVRAGQ9P2Y5 699 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 SCML2Q9UQR0 700 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 PRELID1Q9Y255 219 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 STK38LQ9Y2H1 464 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 PCDHA13Q9Y5I0 950 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 AKAP13Q12802 2813 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 FUOMA2VDF0 154 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 BUD23O43709 281 aaKnown RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 PRAMEF12O95522 483 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 TRIM49P0CI25 452 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 TRIM49CP0CI26 452 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 PLA2G5P39877 138 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 RAP1GAPP47736 663 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 GPR15P49685 360 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 GALK1P51570 392 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 RNASE9P60153 205 aaKnown RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 GCNT1Q02742 428 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 C1QBPQ07021 282 aaKnown RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 CETN1Q12798 172 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 KHDC1Q4VXA5 237 aaKnown RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 STXBP5Q5T5C0 1151 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 NIPAL1Q6NVV3 410 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 RWDD4Q6NW29 188 aaKnown RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 TTC23LQ6PF05 361 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 MYO1HQ8N1T3 1032 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 OR2W6PQ8NHA6 318 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 ALG14Q96F25 216 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 PSD2Q9BQI7 771 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 TWSG1Q9GZX9 223 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 SMYD3Q9H7B4 428 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 C2orf42Q9NWW7 574 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 RBAKQ9NYW8 714 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 KLHL3Q9UH77 587 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 MUTYHQ9UIF7 546 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 CDY1Q9Y6F8 540 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 RASA4BC9J798 803 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 SPECC1L-ADORA2AF8WAN1 911 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 RASA4O43374 803 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 TCEA3O75764 348 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 RSL1D1O76021 490 aaKnown RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 KIR2DL1P43626 348 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 RPL5P46777 297 aaKnown RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 ALDH7A1P49419 539 aaKnown RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 APOFQ13790 326 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 ASIC2Q16515 512 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 SIGIRRQ6IA17 410 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 SPOPLQ6IQ16 392 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 ZC3H18Q86VM9 953 aaKnown RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 VPS36Q86VN1 386 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 PALB2Q86YC2 1186 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 GRAMD2AQ8IUY3 354 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 ERI1Q8IV48 349 aaKnown RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 PJA1Q8NG27 643 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 CENPIQ92674 756 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 USP13Q92995 863 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 SLC2A13Q96QE2 648 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 HEPHQ9BQS7 1158 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 EDEM3Q9BZQ6 932 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 PABPC3Q9H361 631 aaKnown RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 ANLNQ9NQW6 1124 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 ADAMTS1Q9UHI8 967 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 FBXO9Q9UK97 447 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 SORCS3Q9UPU3 1222 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 DUSP10Q9Y6W6 482 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 ZNF840PA6NDX5 716 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 TRIM64BA6NI03 449 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 EIF4E1BA6NMX2 242 aaKnown RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 H3BQ06 376 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 I3L4J1 428 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 DDX3XO00571 662 aaKnown RBP eCLIP7.03□□□□□ -1.286e-27■■■□□ 16.5
CSDE1-204ENST00000369530 GALR2O43603 387 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 LZTS3O60299 673 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 RNASEH1O60930 286 aaKnown RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 PDGFBP01127 241 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 ADH1AP07327 375 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 RHOP08100 348 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 CHRNB2P17787 502 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 DDX6P26196 483 aaKnown RBP eCLIP7.03□□□□□ -1.284e-6■□□□□ 10
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms