RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 SETD3Q86TU7 594 aaPredicted RBP19.82■□□□□ 0.76
CHTOP-204ENST00000368694 TDRD5Q8NAT2 981 aaKnown RBP19.82■□□□□ 0.76
CHTOP-204ENST00000368694 DDI1Q8WTU0 396 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 MRPL38Q96DV4 380 aaKnown RBP19.82■□□□□ 0.76
CHTOP-204ENST00000368694 GORASP1Q9BQQ3 440 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 SPON2Q9BUD6 331 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 SFXN1Q9H9B4 322 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 LRRC4CQ9HCJ2 640 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 UBP1Q9NZI7 540 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 TNRC18O15417 2968 aaPredicted RBP19.82■□□□□ 0.76
CHTOP-204ENST00000368694 GOLGA6CA6NDK9 693 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 MYZAPP0CAP1 466 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 GOLGA6DP0CG33 693 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 CEBPBP17676 345 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 ELK3P41970 407 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 SPARCL1Q14515 664 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 DNAJC21Q5F1R6 531 aaKnown RBP19.82■□□□□ 0.76
CHTOP-204ENST00000368694 LEKR1Q6ZMV7 388 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 ZNF534Q76KX8 674 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 FAM217AQ8IXS0 508 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 VN1R2Q8NFZ6 395 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 USP13Q92995 863 aaPredicted RBP19.82■□□□□ 0.76
CHTOP-204ENST00000368694 CDCA3Q99618 268 aaPredicted RBP19.82■□□□□ 0.76
CHTOP-204ENST00000368694 MUC3BQ9H195 1237 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 GLOD4Q9HC38 313 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 GOLGA6AQ9NYA3 693 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 PSD3Q9NYI0 1048 aa19.82■□□□□ 0.76
CHTOP-204ENST00000368694 ILVBLA1L0T0 632 aa19.81■□□□□ 0.76
CHTOP-204ENST00000368694 SMIM23A6NLE4 172 aa19.81■□□□□ 0.76
CHTOP-204ENST00000368694 AP2A1O95782 977 aa19.81■□□□□ 0.76
CHTOP-204ENST00000368694 PEX11BO96011 259 aa19.81■□□□□ 0.76
CHTOP-204ENST00000368694 BMP8BP34820 402 aa19.81■□□□□ 0.76
CHTOP-204ENST00000368694 SLC10A7Q0GE19 358 aa19.81■□□□□ 0.76
CHTOP-204ENST00000368694 CDH18Q13634 790 aa19.81■□□□□ 0.76
CHTOP-204ENST00000368694 CBX2Q14781 532 aaPredicted RBP19.81■□□□□ 0.76
CHTOP-204ENST00000368694 CCDC38Q502W7 563 aa19.81■□□□□ 0.76
CHTOP-204ENST00000368694 TPGS1Q6ZTW0 290 aa19.81■□□□□ 0.76
CHTOP-204ENST00000368694 PALM2Q8IXS6 379 aa19.81■□□□□ 0.76
CHTOP-204ENST00000368694 ATP11CQ8NB49 1132 aa19.81■□□□□ 0.76
CHTOP-204ENST00000368694 FATE1Q969F0 183 aa19.81■□□□□ 0.76
CHTOP-204ENST00000368694 WDR83Q9BRX9 315 aaKnown RBP19.81■□□□□ 0.76
CHTOP-204ENST00000368694 NT5MQ9NPB1 228 aa19.81■□□□□ 0.76
CHTOP-204ENST00000368694 PIH1D1Q9NWS0 290 aaKnown RBP19.81■□□□□ 0.76
CHTOP-204ENST00000368694 TBC1D30Q9Y2I9 924 aa19.81■□□□□ 0.76
CHTOP-204ENST00000368694 PDE4DIPQ5VU43 2346 aa19.81■□□□□ 0.76
CHTOP-204ENST00000368694 E2F8A0AVK6 867 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 PRAMEF11O60813 436 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 RNF40O75150 1001 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 PRAMEF12O95522 483 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 ETFBP38117 255 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 MMP13P45452 471 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 ITKQ08881 620 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 RNF219Q5W0B1 726 aaPredicted RBP19.8■□□□□ 0.76
CHTOP-204ENST00000368694 CPXM2Q8N436 756 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 ZSWIM3Q96MP5 696 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 ATP13A1Q9HD20 1204 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 A0A087WUV0 522 aaPredicted RBP19.8■□□□□ 0.76
CHTOP-204ENST00000368694 TLDC2A0PJX2 215 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 SOBPA7XYQ1 873 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 ERI2A8K979 691 aaKnown RBP19.8■□□□□ 0.76
CHTOP-204ENST00000368694 GOLGA8KD6RF30 607 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 LUC7L3O95232 432 aaKnown RBP19.8■□□□□ 0.76
CHTOP-204ENST00000368694 OXCT1P55809 520 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 CXorf57Q6NSI4 855 aaKnown RBP19.8■□□□□ 0.76
CHTOP-204ENST00000368694 LRRC8BQ6P9F7 803 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 SPATA22Q8NHS9 363 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 ITFG1Q8TB96 612 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 ARL8AQ96BM9 186 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 MLPHQ9BV36 600 aaPredicted RBP19.8■□□□□ 0.76
CHTOP-204ENST00000368694 PLK2Q9NYY3 685 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 ZMYM5Q9UJ78 669 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 AAR2Q9Y312 384 aaKnown RBP19.8■□□□□ 0.76
CHTOP-204ENST00000368694 TEX264Q9Y6I9 313 aa19.8■□□□□ 0.76
CHTOP-204ENST00000368694 REV3LO60673 3130 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 USP12O75317 370 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 MT-CYBP00156 380 aaPredicted RBP19.79■□□□□ 0.76
CHTOP-204ENST00000368694 CPP00450 1065 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 ABHD2P08910 425 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 HOXD9P28356 352 aaPredicted RBP19.79■□□□□ 0.76
CHTOP-204ENST00000368694 SSTR1P30872 391 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 MAGEA3P43357 314 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 OLIG2Q13516 323 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 KCNC3Q14003 757 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 LBRQ14739 615 aaKnown RBP19.79■□□□□ 0.76
CHTOP-204ENST00000368694 RARS2Q5T160 578 aaKnown RBP19.79■□□□□ 0.76
CHTOP-204ENST00000368694 IGDCC3Q8IVU1 814 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 MFN1Q8IWA4 741 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 AGGF1Q8N302 714 aaeCLIP19.79■□□□□ 0.76
CHTOP-204ENST00000368694 EPS8L3Q8TE67 593 aaKnown RBP19.79■□□□□ 0.76
CHTOP-204ENST00000368694 OXNAD1Q96HP4 312 aaPredicted RBP19.79■□□□□ 0.76
CHTOP-204ENST00000368694 FCRL5Q96RD9 977 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 APOL5Q9BWW9 433 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 DZANK1Q9NVP4 752 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 BCCIPQ9P287 314 aaKnown RBP eCLIP19.79■□□□□ 0.76
CHTOP-204ENST00000368694 MAD1L1Q9Y6D9 718 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 CBX4O00257 560 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 GFRA2O00451 464 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 ANXA9O76027 345 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 MLNP12872 115 aa19.79■□□□□ 0.76
CHTOP-204ENST00000368694 PHBP35232 272 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms