RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 RETSATQ6NUM9 610 aa14.19□□□□□ -0.14
TPM3-211ENST00000368531 TRMT11Q7Z4G4 463 aaKnown RBP14.19□□□□□ -0.14
TPM3-211ENST00000368531 ADAT2Q7Z6V5 191 aaKnown RBP14.19□□□□□ -0.14
TPM3-211ENST00000368531 ATPAF2Q8N5M1 289 aa14.19□□□□□ -0.14
TPM3-211ENST00000368531 KCNV2Q8TDN2 545 aa14.19□□□□□ -0.14
TPM3-211ENST00000368531 ACDQ96AP0 544 aa14.19□□□□□ -0.14
TPM3-211ENST00000368531 WDR24Q96S15 920 aa14.19□□□□□ -0.14
TPM3-211ENST00000368531 KCND1Q9NSA2 647 aa14.19□□□□□ -0.14
TPM3-211ENST00000368531 DTLQ9NZJ0 730 aa14.19□□□□□ -0.14
TPM3-211ENST00000368531 DLGAP2Q9P1A6 1054 aa14.19□□□□□ -0.14
TPM3-211ENST00000368531 IPO11Q9UI26 975 aaKnown RBP14.19□□□□□ -0.14
TPM3-211ENST00000368531 SMAD6O43541 496 aaKnown RBP14.18□□□□□ -0.14
TPM3-211ENST00000368531 CEP104O60308 925 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 GPR37L1O60883 481 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 EPHX1P07099 455 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 SRCP12931 536 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 VAV1P15498 845 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 COL9A1P20849 921 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 SATB1Q01826 763 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 E2F5Q15329 346 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 DLG2Q15700 870 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 TMEM92Q6UXU6 159 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 BBS12Q6ZW61 710 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 SH2D3CQ8N5H7 860 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 CCNYQ8ND76 341 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 UBE2Q2Q8WVN8 375 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 P3H4Q92791 437 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 MYO19Q96H55 970 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 FAM118BQ9BPY3 351 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 C1QTNF1Q9BXJ1 281 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 TNKS2Q9H2K2 1166 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 UBA2Q9UBT2 640 aaPredicted RBP14.18□□□□□ -0.14
TPM3-211ENST00000368531 MMP17Q9ULZ9 603 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 SLC8A2Q9UPR5 921 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 FCF1Q9Y324 198 aaKnown RBP14.18□□□□□ -0.14
TPM3-211ENST00000368531 KMT2EQ8IZD2 1858 aa14.18□□□□□ -0.14
TPM3-211ENST00000368531 NCOR1O75376 2440 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 TCRBV7S2A1N4TA0A589 114 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 PRR33A8MZF0 331 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 CHURC1-FNTBB4DL54 471 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 SYNCRIPO60506 623 aaKnown RBP14.17□□□□□ -0.14
TPM3-211ENST00000368531 PRAMEF11O60813 436 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 TJP3O95049 919 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 CD160O95971 181 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 TGM2P21980 687 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 GARSP41250 739 aaKnown RBP14.17□□□□□ -0.14
TPM3-211ENST00000368531 MAGEA9P43362 315 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 CXCL12P48061 93 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 SERPINH1P50454 418 aaKnown RBP14.17□□□□□ -0.14
TPM3-211ENST00000368531 IL10RBQ08334 325 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 GALNT2Q10471 571 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 HSF5Q4G112 596 aaPredicted RBP14.17□□□□□ -0.14
TPM3-211ENST00000368531 FAM182AQ5T1J6 154 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 KIAA1211LQ6NV74 962 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 ZC3H18Q86VM9 953 aaKnown RBP14.17□□□□□ -0.14
TPM3-211ENST00000368531 SPEM1Q8N4L4 309 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 DTWD2Q8NBA8 298 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 HHIPQ96QV1 700 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 TMEM245Q9H330 911 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 PRDM16Q9HAZ2 1276 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 HS3ST2Q9Y278 367 aa14.17□□□□□ -0.14
TPM3-211ENST00000368531 CKAP5Q14008 2032 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 ZSCAN5CA6NGD5 496 aaPredicted RBP14.16□□□□□ -0.14
TPM3-211ENST00000368531 NPC1O15118 1278 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 ATP9BO43861 1147 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 MAFKO60675 156 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 SIN3BO75182 1162 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 TMCC1O94876 653 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 MX2P20592 715 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 PTPN7P35236 360 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 GEMIN4P57678 1058 aaKnown RBP14.16□□□□□ -0.14
TPM3-211ENST00000368531 OTUD4Q01804 1114 aaKnown RBP14.16□□□□□ -0.14
TPM3-211ENST00000368531 SLC20A2Q08357 652 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 AP1B1Q10567 949 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 ENPP2Q13822 863 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 STARD3Q14849 445 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 CYTH1Q15438 398 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 CRY1Q16526 586 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 C22orf39Q6P5X5 142 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 TSSK4Q6SA08 328 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 Q6ZVU0 165 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 SYT13Q7L8C5 426 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 CACUL1Q86Y37 369 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 RYBPQ8N488 228 aaPredicted RBP14.16□□□□□ -0.14
TPM3-211ENST00000368531 ACTL9Q8TC94 416 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 LGMNQ99538 433 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 GABRG3Q99928 467 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 LRFN3Q9BTN0 628 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 TM6SF2Q9BZW4 377 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 CARD9Q9H257 536 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 C10orf88Q9H8K7 445 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 PDFQ9HBH1 243 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 SUN2Q9UH99 717 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 EFR3BQ9Y2G0 817 aa14.16□□□□□ -0.14
TPM3-211ENST00000368531 EDDM13A0A1B0GTR0 161 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 TCRBV21S2A2A0A5A6 115 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 H7C0C1 242 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 LAMTOR5O43504 91 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 ATP5OP48047 213 aa14.15□□□□□ -0.14
TPM3-211ENST00000368531 PXNP49023 591 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms