RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 SMYD2Q9NRG4 433 aa15.26■□□□□ 0.03
NEK2-201ENST00000366998 ASB3Q9Y575 518 aa15.26■□□□□ 0.03
NEK2-201ENST00000366998 LAMA2P24043 3122 aaKnown RBP15.25■□□□□ 0.03
NEK2-201ENST00000366998 FAM159BA6NKW6 160 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 ATP9BO43861 1147 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 TSPAN3O60637 253 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 FAM155BO75949 473 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 POLBP06746 335 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 C8AP07357 584 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 GABRR2P28476 465 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 BMPR1AP36894 532 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 YBEYP58557 167 aaPredicted RBP15.25■□□□□ 0.03
NEK2-201ENST00000366998 ERVFC1P60507 584 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 RPS24P62847 133 aaKnown RBP15.25■□□□□ 0.03
NEK2-201ENST00000366998 CDH17Q12864 832 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 SERINC3Q13530 473 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 HNRNPDQ14103 355 aaKnown RBP15.25■□□□□ 0.03
NEK2-201ENST00000366998 C5orf22Q49AR2 442 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 CERCAMQ5T4B2 595 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 TXNDC8Q6A555 127 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 CES3Q6UWW8 571 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 ARL14EPQ8N8R7 260 aaPredicted RBP15.25■□□□□ 0.03
NEK2-201ENST00000366998 KREMEN2Q8NCW0 462 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 TTC16Q8NEE8 873 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 AZIN2Q96A70 460 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 PRICKLE1Q96MT3 831 aaPredicted RBP15.25■□□□□ 0.03
NEK2-201ENST00000366998 FICDQ9BVA6 458 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 IL21Q9HBE4 155 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 AGO1Q9UL18 857 aaKnown RBP15.25■□□□□ 0.03
NEK2-201ENST00000366998 RPS6KL1Q9Y6S9 549 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 CHD5Q8TDI0 1954 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 GMNCA6NCL1 334 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 FAM47DPA6NHR8 397 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 SRRM3A6NNA2 597 aaPredicted RBP15.25■□□□□ 0.03
NEK2-201ENST00000366998 NDUFAB1O14561 156 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 PMPCBO75439 489 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 PEX11BO96011 259 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 MT-ND3P03897 115 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 TPH1P17752 444 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 ETFBP38117 255 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 NPY2RP49146 381 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 CDH4P55283 916 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 SMAD3P84022 425 aaKnown RBP15.25■□□□□ 0.03
NEK2-201ENST00000366998 CYP4F8P98187 520 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 IL10RBQ08334 325 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 SLC10A7Q0GE19 358 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 MPP2Q14168 576 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 ZSCAN26Q16670 478 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 UNC5BQ8IZJ1 945 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 HS6ST3Q8IZP7 471 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 ELMOD1Q8N336 334 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 MRPS31Q92665 395 aaKnown RBP15.25■□□□□ 0.03
NEK2-201ENST00000366998 FATE1Q969F0 183 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 ZNF669Q96BR6 464 aaPredicted RBP15.25■□□□□ 0.03
NEK2-201ENST00000366998 SLC22A12Q96S37 553 aa15.25■□□□□ 0.03
NEK2-201ENST00000366998 DDX50Q9BQ39 737 aaKnown RBP15.25■□□□□ 0.03
NEK2-201ENST00000366998 MTCL1Q9Y4B5 1905 aaKnown RBP15.24■□□□□ 0.03
NEK2-201ENST00000366998 AP3B1O00203 1094 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 SCAMP3O14828 347 aaKnown RBP15.24■□□□□ 0.03
NEK2-201ENST00000366998 UGT1A9O60656 530 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 GLUD1P00367 558 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 KRT4P19013 534 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 HDCP19113 662 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 SGSHP51688 502 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 MAXP61244 160 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 SMAD1Q15797 465 aaKnown RBP15.24■□□□□ 0.03
NEK2-201ENST00000366998 SPANXN3Q5MJ09 141 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 ADGRF1Q5T601 910 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 TTC39BQ5VTQ0 682 aaPredicted RBP15.24■□□□□ 0.03
NEK2-201ENST00000366998 LILRA6Q6PI73 481 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 KLHDC8BQ8IXV7 354 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 GDAP1Q8TB36 358 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 PHOSPHO2Q8TCD6 241 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 MZB1Q8WU39 189 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 CDKL2Q92772 493 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 FSD1LQ9BXM9 530 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 SLC25A51Q9H1U9 297 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 MTIF3Q9H2K0 278 aaKnown RBP15.24■□□□□ 0.03
NEK2-201ENST00000366998 UGT1A7Q9HAW7 530 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 UGT1A10Q9HAW8 530 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 UGT1A8Q9HAW9 530 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 MOCS1Q9NZB8 636 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 SMG5Q9UPR3 1016 aaKnown RBP15.24■□□□□ 0.03
NEK2-201ENST00000366998 CPQQ9Y646 472 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 MYLKQ15746 1914 aa15.24■□□□□ 0.03
NEK2-201ENST00000366998 HIDE1A8MVS5 230 aa15.23■□□□□ 0.03
NEK2-201ENST00000366998 GOLGA8RI6L899 631 aa15.23■□□□□ 0.03
NEK2-201ENST00000366998 PRPF4O43172 522 aaKnown RBP eCLIP15.23■□□□□ 0.03
NEK2-201ENST00000366998 CLDN11O75508 207 aa15.23■□□□□ 0.03
NEK2-201ENST00000366998 KRT37O76014 449 aa15.23■□□□□ 0.03
NEK2-201ENST00000366998 CA4P22748 312 aa15.23■□□□□ 0.03
NEK2-201ENST00000366998 GNA12Q03113 381 aa15.23■□□□□ 0.03
NEK2-201ENST00000366998 PCSK7Q16549 785 aa15.23■□□□□ 0.03
NEK2-201ENST00000366998 LGSNQ5TDP6 509 aa15.23■□□□□ 0.03
NEK2-201ENST00000366998 RASSF3Q86WH2 238 aa15.23■□□□□ 0.03
NEK2-201ENST00000366998 OR7D4Q8NG98 312 aa15.23■□□□□ 0.03
NEK2-201ENST00000366998 POF1BQ8WVV4 589 aa15.23■□□□□ 0.03
NEK2-201ENST00000366998 TTC17Q96AE7 1141 aa15.23■□□□□ 0.03
NEK2-201ENST00000366998 ZFRQ96KR1 1074 aaKnown RBP15.23■□□□□ 0.03
NEK2-201ENST00000366998 GCNAQ96QF7 691 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms