RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 NOS2P35228 1153 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 IL12RB1P42701 662 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 PTPN9P43378 593 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 PSEN1P49768 467 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 ZNF143P52747 638 aaPredicted RBP8.43□□□□□ -1.06
MRPL55-211ENST00000366738 HADHBP55084 474 aaKnown RBP8.43□□□□□ -1.06
MRPL55-211ENST00000366738 NAP1L1P55209 391 aaKnown RBP8.43□□□□□ -1.06
MRPL55-211ENST00000366738 HDAC4P56524 1084 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 NME3Q13232 169 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 EIF4EBP2Q13542 120 aaPredicted RBP8.43□□□□□ -1.06
MRPL55-211ENST00000366738 ENPP2Q13822 863 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 MESDQ14696 234 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 SMAD1Q15797 465 aaKnown RBP8.43□□□□□ -1.06
MRPL55-211ENST00000366738 HLA-BQ31612 363 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 SLC25A52Q3SY17 297 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 FUT11Q495W5 492 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 TXNRD3NBQ6F5E7 133 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 PCSK4Q6UW60 755 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 DHRS13Q6UX07 377 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 ZNF662Q6ZS27 426 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 CYP4V2Q6ZWL3 525 aaPredicted RBP8.43□□□□□ -1.06
MRPL55-211ENST00000366738 BEND5Q7L4P6 421 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 ARCQ7LC44 396 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 PDCD7Q8N8D1 485 aaKnown RBP8.43□□□□□ -1.06
MRPL55-211ENST00000366738 LRRC57Q8N9N7 239 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 FNIP1Q8TF40 1166 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 SORCS1Q8WY21 1168 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 FOXJ1Q92949 421 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 NT5C3BQ969T7 300 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 TOE1Q96GM8 510 aaKnown RBP8.43□□□□□ -1.06
MRPL55-211ENST00000366738 XPO6Q96QU8 1125 aaKnown RBP8.43□□□□□ -1.06
MRPL55-211ENST00000366738 GPR174Q9BXC1 333 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 FAM204AQ9H8W3 233 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 TMPRSS4Q9NRS4 437 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 DDIT4Q9NX09 232 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 XPO7Q9UIA9 1087 aaKnown RBP8.43□□□□□ -1.06
MRPL55-211ENST00000366738 LSM7Q9UK45 103 aaKnown RBP8.43□□□□□ -1.06
MRPL55-211ENST00000366738 STAP1Q9ULZ2 295 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 SLC27A6Q9Y2P4 619 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 SLCO1B1Q9Y6L6 691 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 STON1Q9Y6Q2 735 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 TMEM131Q92545 1883 aa8.43□□□□□ -1.06
MRPL55-211ENST00000366738 NUMA1Q14980 2115 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 COL12A1Q99715 3063 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 A0A1B0GVT2 93 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 SLC12A8A0AV02 714 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 MYO1FO00160 1098 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 GFRA2O00451 464 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 FANCGO15287 622 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 ZSCAN12O43309 604 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 KRT86O43790 486 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 PROSCO94903 275 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 FTCDO95954 541 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 ZNF883P0CG24 379 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 HLA-EP13747 358 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 COMTP21964 271 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 IL1R2P27930 398 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 CD6P30203 668 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 CORO1AP31146 461 aaKnown RBP8.42□□□□□ -1.06
MRPL55-211ENST00000366738 GJC1P36383 396 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 GGCXP38435 758 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 EIF2S3P41091 472 aaKnown RBP8.42□□□□□ -1.06
MRPL55-211ENST00000366738 MARCKSL1P49006 195 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 COPAP53621 1224 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 TAS2R40P59535 323 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 SEMG2Q02383 582 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 SLC25A11Q02978 314 aaKnown RBP8.42□□□□□ -1.06
MRPL55-211ENST00000366738 CFHR1Q03591 330 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 DEUP1Q05D60 604 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 SMTNL2Q2TAL5 461 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 DCAF12L1Q5VU92 463 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 C11orf63Q6NUN7 778 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 FAM131BQ86XD5 332 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 CACUL1Q86Y37 369 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 DENND1CQ8IV53 801 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 FAM217AQ8IXS0 508 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 TXLNBQ8N3L3 684 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 CCDC185Q8N715 623 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 NIPA2Q8N8Q9 360 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 RNF139Q8WU17 664 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 DNASE2BQ8WZ79 361 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 CENPIQ92674 756 aaPredicted RBP8.42□□□□□ -1.06
MRPL55-211ENST00000366738 PGAP3Q96FM1 320 aaPredicted RBP8.42□□□□□ -1.06
MRPL55-211ENST00000366738 FCRL2Q96LA5 508 aaPredicted RBP8.42□□□□□ -1.06
MRPL55-211ENST00000366738 SERPINB11Q96P15 392 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 CDC6Q99741 560 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 CNPY3Q9BT09 278 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 TRIM62Q9BVG3 475 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 MAGEB5Q9BZ81 275 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 KCND1Q9NSA2 647 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 OLA1Q9NTK5 396 aaKnown RBP8.42□□□□□ -1.06
MRPL55-211ENST00000366738 KLHL11Q9NVR0 708 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 MARCH2Q9P0N8 246 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 IP6K2Q9UHH9 426 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 EIF2B4Q9UI10 523 aaKnown RBP8.42□□□□□ -1.06
MRPL55-211ENST00000366738 PACSIN2Q9UNF0 486 aaPredicted RBP8.42□□□□□ -1.06
MRPL55-211ENST00000366738 LRRK2Q5S007 2527 aa8.42□□□□□ -1.06
MRPL55-211ENST00000366738 UBR5O95071 2799 aaPredicted RBP8.42□□□□□ -1.06
MRPL55-211ENST00000366738 BCAT2O15382 392 aaPredicted RBP8.41□□□□□ -1.06
MRPL55-211ENST00000366738 ENDOD1O94919 500 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms