RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 HLA-DQA2P01906 255 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 RXRAP19793 462 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 CD72P21854 359 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 PPP3CCP48454 512 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 AARSP49588 968 aaKnown RBP eCLIP4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 PGGT1BP53609 377 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 PRKG1Q13976 671 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 ERV3-1Q14264 604 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 ZNF585BQ52M93 769 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 RUNDC3AQ59EK9 446 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 UBAP2Q5T6F2 1119 aaKnown RBP4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 DCAF12L2Q5VW00 463 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 TRIM74Q86UV6 250 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 TRIM73Q86UV7 250 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 SCAIQ8N9R8 606 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 CEP76Q8TAP6 659 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 NEUROG1Q92886 237 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 MIB2Q96AX9 1013 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 CADM1Q9BY67 442 aaKnown RBP4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 CTDSP1Q9GZU7 261 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 SAYSD1Q9NPB0 183 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 RNF146Q9NTX7 359 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 NCKIPSDQ9NZQ3 722 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 KIF17Q9P2E2 1029 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 ICKQ9UPZ9 632 aa4.9□□□□□ -1.63
RNU4-28P-201ENST00000364739 hCG_1642624A0A1W2PR95 340 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 RGS14O43566 566 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 DDAH2O95865 285 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 LCATP04180 440 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 NGFRP08138 427 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 UNGP13051 313 aaPredicted RBP4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 TNFRSF8P28908 595 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 CCKBRP32239 447 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 ADD2P35612 726 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 PNPLA4P41247 253 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 PTPN9P43378 593 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 RFX2P48378 723 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 RPS6KA3P51812 740 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 MVDP53602 400 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 GPS2Q13227 327 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 SH2D4BQ5SQS7 431 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 ANO1Q5XXA6 986 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 Q6ZSV7 163 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 ZNF367Q7RTV3 350 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 GALNT7Q86SF2 657 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 CAMK1DQ8IU85 385 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 FAM185AQ8N0U4 392 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 FBXL14Q8N1E6 418 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 PRR26Q8N8Z3 221 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 TRAPPC12Q8WVT3 735 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 FAR1Q8WVX9 515 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 TBC1D20Q96BZ9 403 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 THOC3Q96J01 351 aaKnown RBP4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 APOLD1Q96LR9 279 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 KRCC1Q9NPI7 259 aaPredicted RBP4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 ITM2CQ9NQX7 267 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 NLKQ9UBE8 527 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 PCDHA7Q9UN72 937 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 SLC4A4Q9Y6R1 1079 aa4.89□□□□□ -1.63
RNU4-28P-201ENST00000364739 GAGE12JA6NER3 117 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 HSPB6O14558 160 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 TFRCP02786 760 aaKnown RBP4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 ARSBP15848 533 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 PRKCHP24723 683 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 AVPR1AP37288 418 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 MLH1P40692 756 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 RASSF2P50749 326 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 ABATP80404 500 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 ARHGAP8P85298 464 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 IL13RA2Q14627 380 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 PDCD2Q16342 344 aaPredicted RBP4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 DUSP6Q16828 381 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 FBXO43Q4G163 708 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 INO80DQ53TQ3 878 aaPredicted RBP4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 FNBP1LQ5T0N5 605 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 TMEM268Q5VZI3 342 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 KIAA1161Q6NSJ0 714 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 FTSJ3Q8IY81 847 aaKnown RBP4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 CADM3Q8N126 398 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 NTPCRQ9BSD7 190 aaKnown RBP4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 IFT27Q9BW83 186 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 SF3B5Q9BWJ5 86 aaKnown RBP4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 CXorf56Q9H5V9 222 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 TMLHEQ9NVH6 421 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 HDAC6Q9UBN7 1215 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 LRP12Q9Y561 859 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 COMMD10Q9Y6G5 202 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 MST1RQ04912 1400 aa4.88□□□□□ -1.63
RNU4-28P-201ENST00000364739 LACTBL1A8MY62 500 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 SEPT4O43236 478 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 LIASO43766 372 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 SLC28A2O43868 658 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 CCNT1O60563 726 aaKnown RBP4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 ACAA1P09110 424 aaPredicted RBP4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 T-ENOLP0DO92 83 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 THPOP40225 353 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 MTNR1AP48039 350 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 PCYT1AP49585 367 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 ENTPD1P49961 510 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms