RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 DGKAP23743 735 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 FRG1Q14331 258 aaKnown RBP18.63■□□□□ 0.57
SHANK1-202ENST00000359082 SPANXN2Q5MJ10 180 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 FBXL19Q6PCT2 694 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 AGMOQ6ZNB7 445 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 COLGALT2Q8IYK4 626 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 ELMO1Q92556 727 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 ZBTB45Q96K62 511 aaPredicted RBP18.63■□□□□ 0.57
SHANK1-202ENST00000359082 L1RE1Q9UN81 338 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 RPLP2P05387 115 aaKnown RBP18.63■□□□□ 0.57
SHANK1-202ENST00000359082 ALDH5A1P51649 535 aaPredicted RBP18.63■□□□□ 0.57
SHANK1-202ENST00000359082 CRADDP78560 199 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 MRPS22P82650 360 aaKnown RBP18.63■□□□□ 0.57
SHANK1-202ENST00000359082 INTS5Q6P9B9 1019 aaKnown RBP18.63■□□□□ 0.57
SHANK1-202ENST00000359082 SCAIQ8N9R8 606 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 STARD8Q92502 1023 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 ZSCAN5DPP0CG00 497 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 CTSEP14091 401 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 NDUFA5Q16718 116 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 CXorf40AQ8TE69 158 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 ELOVL4Q9GZR5 314 aa18.63■□□□□ 0.57
SHANK1-202ENST00000359082 ACSL4O60488 711 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 WARSP23381 471 aaKnown RBP18.62■□□□□ 0.57
SHANK1-202ENST00000359082 GPAT3Q53EU6 434 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 EXOC3L1Q86VI1 746 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 ARIH1Q9Y4X5 557 aaPredicted RBP18.62■□□□□ 0.57
SHANK1-202ENST00000359082 PIGNO95427 931 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 RPL14P50914 215 aaKnown RBP18.62■□□□□ 0.57
SHANK1-202ENST00000359082 MTA1Q13330 715 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 PREPLQ4J6C6 727 aaPredicted RBP18.62■□□□□ 0.57
SHANK1-202ENST00000359082 PAGE2BQ5JRK9 111 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 CDKAL1Q5VV42 579 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 CYP4X1Q8N118 509 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 CYP2W1Q8TAV3 490 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 AKT1S1Q96B36 256 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 GRIP2Q9C0E4 1043 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 ALADP13716 330 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 PSMB4P28070 264 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 TKTP29401 623 aaKnown RBP18.62■□□□□ 0.57
SHANK1-202ENST00000359082 CD86P42081 329 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 LPIN1Q14693 890 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 ZFP1Q6P2D0 407 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 EIF3MQ7L2H7 374 aaKnown RBP18.62■□□□□ 0.57
SHANK1-202ENST00000359082 TBCBQ99426 244 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 FBXO6Q9NRD1 293 aaPredicted RBP18.62■□□□□ 0.57
SHANK1-202ENST00000359082 GPSM3Q9Y4H4 160 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 SLC15A2Q16348 729 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 TEKT5Q96M29 485 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 PPIDQ08752 370 aaKnown RBP18.62■□□□□ 0.57
SHANK1-202ENST00000359082 NAB1Q13506 487 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 SAMD4BQ5PRF9 694 aaKnown RBP18.62■□□□□ 0.57
SHANK1-202ENST00000359082 NOL9Q5SY16 702 aaKnown RBP18.62■□□□□ 0.57
SHANK1-202ENST00000359082 MZT2AQ6P582 158 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 FAM220AQ7Z4H9 259 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 C8orf59Q8N0T1 100 aaPredicted RBP18.62■□□□□ 0.57
SHANK1-202ENST00000359082 OMDQ99983 421 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 POLR1EQ9GZS1 481 aaKnown RBP18.62■□□□□ 0.57
SHANK1-202ENST00000359082 EXO5Q9H790 373 aa18.62■□□□□ 0.57
SHANK1-202ENST00000359082 SLITRK3O94933 977 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 PALB2Q86YC2 1186 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 RRAGCQ9HB90 399 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 ANAPC2Q9UJX6 822 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 A0A088AWK7 358 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 FAM86B1E9PN63 330 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 ZNF10P21506 573 aaPredicted RBP18.61■□□□□ 0.57
SHANK1-202ENST00000359082 LZTR1Q8N653 840 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 MAGEE2Q8TD90 523 aaPredicted RBP18.61■□□□□ 0.57
SHANK1-202ENST00000359082 HDAC7Q8WUI4 952 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 SLC4A5Q9BY07 1137 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.61■□□□□ 0.57
SHANK1-202ENST00000359082 MMP14P50281 582 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 HYIQ5T013 277 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 MAGEC3Q8TD91 643 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 SAE1Q9UBE0 346 aaPredicted RBP18.61■□□□□ 0.57
SHANK1-202ENST00000359082 XYLBO75191 536 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 ADORA2AP29274 412 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 ACSM2AQ08AH3 577 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 FAM187BQ17R55 369 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 ACSM2BQ68CK6 577 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 KRT74Q7RTS7 529 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 AHI1Q8N157 1196 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 OR52K1Q8NGK4 314 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 ANKRD27Q96NW4 1050 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 SLC9A7Q96T83 725 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 GNPTGQ9UJJ9 305 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 ATXN2Q99700 1313 aaKnown RBP18.61■□□□□ 0.57
SHANK1-202ENST00000359082 ANKRD63C9JTQ0 380 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 EHD4Q9H223 541 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 DNAJC18Q9H819 358 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 GDF3Q9NR23 364 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 TRPV2Q9Y5S1 764 aa18.61■□□□□ 0.57
SHANK1-202ENST00000359082 BUD23O43709 281 aaKnown RBP18.6■□□□□ 0.57
SHANK1-202ENST00000359082 PSEN2P49810 448 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 COPZ1P61923 177 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 PRR23CQ6ZRP0 262 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 SELENOMQ8WWX9 145 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 ASB2Q96Q27 587 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 SLC25A23Q9BV35 468 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 ULBP1Q9BZM6 244 aa18.6■□□□□ 0.57
SHANK1-202ENST00000359082 SCAMP3O14828 347 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms