RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 MAXP61244 160 aa12.9□□□□□ -0.35
GGPS1-202ENST00000358966 PPP2R5DQ14738 602 aa12.9□□□□□ -0.35
GGPS1-202ENST00000358966 NADSYN1Q6IA69 706 aa12.9□□□□□ -0.35
GGPS1-202ENST00000358966 FBXL22Q6P050 247 aa12.9□□□□□ -0.35
GGPS1-202ENST00000358966 LCA5Q86VQ0 697 aa12.9□□□□□ -0.35
GGPS1-202ENST00000358966 RNF168Q8IYW5 571 aaPredicted RBP12.9□□□□□ -0.35
GGPS1-202ENST00000358966 ATPAF2Q8N5M1 289 aa12.9□□□□□ -0.35
GGPS1-202ENST00000358966 ZNF689Q96CS4 500 aaPredicted RBP12.9□□□□□ -0.35
GGPS1-202ENST00000358966 HDAC11Q96DB2 347 aa12.9□□□□□ -0.35
GGPS1-202ENST00000358966 HAPLN3Q96S86 360 aa12.9□□□□□ -0.35
GGPS1-202ENST00000358966 TRABDQ9H4I3 376 aa12.9□□□□□ -0.35
GGPS1-202ENST00000358966 RC3H2Q9HBD1 1191 aaKnown RBP12.9□□□□□ -0.35
GGPS1-202ENST00000358966 SMPD4Q9NXE4 827 aa12.9□□□□□ -0.35
GGPS1-202ENST00000358966 IL37Q9NZH6 218 aa12.9□□□□□ -0.35
GGPS1-202ENST00000358966 PSMC3IPQ9P2W1 217 aaPredicted RBP12.9□□□□□ -0.35
GGPS1-202ENST00000358966 FAM92AA1XBS5 289 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 TMEM221A6NGB7 291 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 H7C4K7 107 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 STK10O94804 968 aaKnown RBP12.89□□□□□ -0.35
GGPS1-202ENST00000358966 TOP3BO95985 862 aaKnown RBP12.89□□□□□ -0.35
GGPS1-202ENST00000358966 PDHA1P08559 390 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 HSPA8P11142 646 aaKnown RBP12.89□□□□□ -0.35
GGPS1-202ENST00000358966 KRT4P19013 534 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 SERPINB6P35237 376 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 GMPRP36959 345 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 MAGEA6P43360 314 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 HCAR3P49019 387 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 MLLT6P55198 1093 aaPredicted RBP12.89□□□□□ -0.35
GGPS1-202ENST00000358966 TAOK1Q7L7X3 1001 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 SPOCK2Q92563 424 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 CORO1BQ9BR76 489 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 NACA2Q9H009 215 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 ARHGAP42A6NI28 874 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 GOLGA8TH3BQL2 631 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 J3KR12 359 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 ATP9BO43861 1147 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 PHBP35232 272 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 RPA3P35244 121 aaPredicted RBP12.89□□□□□ -0.35
GGPS1-202ENST00000358966 MSH2P43246 934 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 CERCAMQ5T4B2 595 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 SLC39A11Q8N1S5 342 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 DNAJC5GQ8N7S2 189 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 ARNTL2Q8WYA1 636 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 DPF3Q92784 378 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 BHMTQ93088 406 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 HMCESQ96FZ2 354 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 DHRS1Q96LJ7 313 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 ZNF558Q96NG5 402 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 CYP2S1Q96SQ9 504 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 GRID1Q9ULK0 1009 aa12.89□□□□□ -0.35
GGPS1-202ENST00000358966 NRG2O14511 850 aaPredicted RBP12.88□□□□□ -0.35
GGPS1-202ENST00000358966 MAFKO60675 156 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 APOEP02649 317 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 SOD2P04179 222 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 CCNB1P14635 433 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 TPSB2P20231 275 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 CCND1P24385 295 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 ABCG1P45844 678 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 MRPS35P82673 323 aaKnown RBP12.88□□□□□ -0.35
GGPS1-202ENST00000358966 TPSAB1Q15661 275 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 TEX44Q53QW1 395 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 C1orf53Q5VUE5 145 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 MSANTD2Q6P1R3 559 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 CEP128Q6ZU80 1094 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 BEND5Q7L4P6 421 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 ATP2A3Q93084 1043 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 ZNF778Q96MU6 729 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 RPRD1AQ96P16 312 aaPredicted RBP12.88□□□□□ -0.35
GGPS1-202ENST00000358966 SLC22A12Q96S37 553 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 TRIM62Q9BVG3 475 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 RNF38Q9H0F5 515 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 LNPEPQ9UIQ6 1025 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 LTBP2Q14767 1821 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 SRRM3A6NNA2 597 aaPredicted RBP12.88□□□□□ -0.35
GGPS1-202ENST00000358966 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.88□□□□□ -0.35
GGPS1-202ENST00000358966 VIMP08670 466 aaKnown RBP12.88□□□□□ -0.35
GGPS1-202ENST00000358966 HMGA1P17096 107 aaKnown RBP12.88□□□□□ -0.35
GGPS1-202ENST00000358966 EN2P19622 333 aaPredicted RBP12.88□□□□□ -0.35
GGPS1-202ENST00000358966 SLC6A4P31645 630 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 SGSHP51688 502 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 PARP6Q2NL67 630 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 PDZD4Q76G19 769 aaPredicted RBP12.88□□□□□ -0.35
GGPS1-202ENST00000358966 CCDC80Q76M96 950 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 CHSY1Q86X52 802 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 SPNS2Q8IVW8 549 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 ZNF683Q8IZ20 524 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 RTL3Q8N8U3 475 aaKnown RBP12.88□□□□□ -0.35
GGPS1-202ENST00000358966 DNAAF3Q8N9W5 541 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 OR52K2Q8NGK3 314 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 ARMC5Q96C12 935 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 SERAC1Q96JX3 654 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 EBNA1BP2Q99848 306 aaKnown RBP12.88□□□□□ -0.35
GGPS1-202ENST00000358966 STMN4Q9H169 189 aaPredicted RBP12.88□□□□□ -0.35
GGPS1-202ENST00000358966 ALG13Q9NP73 1137 aaKnown RBP12.88□□□□□ -0.35
GGPS1-202ENST00000358966 YIPF1Q9Y548 306 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 PSAT1Q9Y617 370 aa12.88□□□□□ -0.35
GGPS1-202ENST00000358966 E2F8A0AVK6 867 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 LCHNA4D1U4 455 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 COCHO43405 550 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 HLA-DQB2P05538 268 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms