RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 SCN3AQ9NY46 2000 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 ECE2O60344 883 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 GNL1P36915 607 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 MAMLD1Q13495 774 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 HPS6Q86YV9 775 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF518BQ9C0D4 1074 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 CDHR5Q9HBB8 845 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 GRHL1Q9NZI5 618 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 BDP1A6H8Y1 2624 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 OVOS2A0A0J9YW53 1432 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 CYP4B1P13584 511 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 CASP4P49662 377 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 CTC1Q2NKJ3 1217 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 OVOS2Q6IE36 1432 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 KDELC2Q7Z4H8 507 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 CAMKK1Q8N5S9 505 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 ITPKCQ96DU7 683 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 PPP1R16BQ96T49 567 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 WWOXQ9NZC7 414 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 ABCA8O94911 1581 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 SH3PXD2BA1X283 911 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 PSIP1O75475 530 aaKnown RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 PGK2P07205 417 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 DUOXA2Q1HG44 320 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 TMEM179Q6ZVK1 233 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 IRF2BP1Q8IU81 584 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 HERC6Q8IVU3 1022 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF540Q8NDQ6 660 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 FAM49BQ9NUQ9 324 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 MORF4L1Q9UBU8 362 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 RXRGP48443 463 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 PRIM2P49643 509 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 HSD17B4P51659 736 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 WDR4P57081 412 aaKnown RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 AHSA2Q719I0 299 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 CGRRF1Q99675 332 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF717Q9BY31 904 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 MRPL4Q9BYD3 311 aaKnown RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 ZFC3H1O60293 1989 aaKnown RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 MED24O75448 989 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 SLC7A2P52569 658 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 KLF10Q13118 480 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 GOLGA7BQ2TAP0 167 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 BBS12Q6ZW61 710 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 SLC47A2Q86VL8 602 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 PTCD3Q96EY7 689 aaKnown RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 MID1IP1Q9NPA3 183 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 CD3EAPO15446 510 aaKnown RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 UGT2B11O75310 529 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 PRKCBP05771 671 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 ITGAVP06756 1048 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 THRBP10828 461 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 ATF6P18850 670 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 RASA1P20936 1047 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 NR4A1P22736 598 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 CAPGP40121 348 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 WDR72Q3MJ13 1102 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 SLC22A16Q86VW1 577 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 OR8H3Q8N146 312 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 CBWD1Q9BRT8 395 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 LIN28AQ9H9Z2 209 aaKnown RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 CCNL1Q9UK58 526 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 MTF2Q9Y483 593 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-203ENST00000358544 SLC30A1Q9Y6M5 507 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 TEX28O15482 410 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 ITM2AO43736 263 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 PRKACBP22694 351 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 DLGAP5Q15398 846 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF470Q6ECI4 717 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 GK5Q6ZS86 529 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 RASAL3Q86YV0 1011 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 PARP8Q8N3A8 854 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 IRGQQ8WZA9 623 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 ZNF560Q96MR9 790 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 PRRG3Q9BZD7 231 aa6.16□□□□□ -1.42
VPS13B-203ENST00000358544 TMEM2Q9UHN6 1383 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 H0YIN7 160 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 PGRP06401 933 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 PTGIRP43119 386 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 TUBP50607 506 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 EPHX4Q8IUS5 362 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 BIRC8Q96P09 236 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 PNPOQ9NVS9 261 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 ADPRHL2Q9NX46 363 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 VAV3Q9UKW4 847 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 A0A1B0GVG6 124 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 VPS26AO75436 327 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 ASNSP08243 561 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 IDO1P14902 403 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 LBPP18428 481 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 MPSTP25325 297 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 SDC2P34741 201 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 MTMR1Q13613 665 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 OGFOD2Q6N063 350 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 PLET1Q6UQ28 207 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 CASP12Q6UXS9 341 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 PDSS2Q86YH6 399 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 ZDHHC13Q8IUH4 622 aa6.15□□□□□ -1.42
VPS13B-203ENST00000358544 C10orf107Q8IVU9 208 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms