RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 PCDH8O95206 1070 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 CENPBP07199 599 aaPredicted RBP16.27■□□□□ 0.2
IFT20-202ENST00000357896 NME1P15531 152 aaKnown RBP16.27■□□□□ 0.2
IFT20-202ENST00000357896 RPIAP49247 311 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 NUMBP49757 651 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 CLDN2P57739 230 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 NR0B2Q15466 257 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 EDRF1Q3B7T1 1238 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 LINC00303Q3SY05 128 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 ZC3H12AQ5D1E8 599 aaKnown RBP16.27■□□□□ 0.2
IFT20-202ENST00000357896 GUSBP11Q6P575 273 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 GCNT7Q6ZNI0 430 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 Q6ZVU0 165 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 PTAR1Q7Z6K3 402 aaPredicted RBP16.27■□□□□ 0.2
IFT20-202ENST00000357896 ATP6V0D2Q8N8Y2 350 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 TFAP2BQ92481 460 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 GLMNQ92990 594 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 FAM149B1Q96BN6 582 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 SGF29Q96ES7 293 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 FEM1AQ9BSK4 669 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 WDR70Q9NW82 654 aa16.27■□□□□ 0.2
IFT20-202ENST00000357896 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.27■□□□□ 0.2
IFT20-202ENST00000357896 SPTY2D1-AS1A0A0U1RR47 76 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 KPNA3O00505 521 aaPredicted RBP16.26■□□□□ 0.19
IFT20-202ENST00000357896 CETN3O15182 167 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 EFSO43281 561 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 AFPP02771 609 aaKnown RBP16.26■□□□□ 0.19
IFT20-202ENST00000357896 PRR29P0C7W0 189 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 SLC2A3P11169 496 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 FZD2Q14332 565 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 CBWD6Q4V339 395 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 CBWD3Q5JTY5 395 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 CBWD5Q5RIA9 395 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 TCERG1LQ5VWI1 586 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 ATL3Q6DD88 541 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 CXorf57Q6NSI4 855 aaKnown RBP16.26■□□□□ 0.19
IFT20-202ENST00000357896 TMEM270Q6UE05 265 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 TAC4Q86UU9 113 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 PARGQ86W56 976 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 SH2D3CQ8N5H7 860 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 TMIEQ8NEW7 156 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 NAT6Q93015 286 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 IL12RB2Q99665 862 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 SEMA3CQ99985 751 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 GPR27Q9NS67 375 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 FOXD4L1Q9NU39 408 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 SEPT3Q9UH03 358 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 IPO11Q9UI26 975 aaKnown RBP16.26■□□□□ 0.19
IFT20-202ENST00000357896 VPS28Q9UK41 221 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 CFAP45Q9UL16 551 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 PCDHGA7Q9Y5G6 932 aa16.26■□□□□ 0.19
IFT20-202ENST00000357896 AQP9O43315 295 aa16.25■□□□□ 0.19
IFT20-202ENST00000357896 PRNPP04156 253 aa16.25■□□□□ 0.19
IFT20-202ENST00000357896 CHRNA3P32297 505 aa16.25■□□□□ 0.19
IFT20-202ENST00000357896 RABIFP47224 123 aa16.25■□□□□ 0.19
IFT20-202ENST00000357896 EIF3IQ13347 325 aaKnown RBP16.25■□□□□ 0.19
IFT20-202ENST00000357896 ZCWPW2Q504Y3 356 aa16.25■□□□□ 0.19
IFT20-202ENST00000357896 SYPL2Q5VXT5 272 aa16.25■□□□□ 0.19
IFT20-202ENST00000357896 OR6B2Q6IFH4 312 aa16.25■□□□□ 0.19
IFT20-202ENST00000357896 KYAT3Q6YP21 454 aaKnown RBP16.25■□□□□ 0.19
IFT20-202ENST00000357896 C14orf80Q86SX3 495 aa16.25■□□□□ 0.19
IFT20-202ENST00000357896 UBR7Q8N806 425 aa16.25■□□□□ 0.19
IFT20-202ENST00000357896 ALG14Q96F25 216 aa16.25■□□□□ 0.19
IFT20-202ENST00000357896 BMFQ96LC9 184 aa16.25■□□□□ 0.19
IFT20-202ENST00000357896 PRMT1Q99873 361 aaKnown RBP16.25■□□□□ 0.19
IFT20-202ENST00000357896 HDAC8Q9BY41 377 aa16.25■□□□□ 0.19
IFT20-202ENST00000357896 SLC17A9Q9BYT1 436 aa16.25■□□□□ 0.19
IFT20-202ENST00000357896 DOCK9Q9BZ29 2069 aa16.25■□□□□ 0.19
IFT20-202ENST00000357896 TDRD6O60522 2096 aaKnown RBP16.24■□□□□ 0.19
IFT20-202ENST00000357896 TMX2-CTNND1H3BSU7 103 aa16.24■□□□□ 0.19
IFT20-202ENST00000357896 MUSKO15146 869 aa16.24■□□□□ 0.19
IFT20-202ENST00000357896 TRUB2O95900 331 aaKnown RBP16.24■□□□□ 0.19
IFT20-202ENST00000357896 ITGB6P18564 788 aa16.24■□□□□ 0.19
IFT20-202ENST00000357896 ACADSBP45954 432 aa16.24■□□□□ 0.19
IFT20-202ENST00000357896 RPS21P63220 83 aaKnown RBP16.24■□□□□ 0.19
IFT20-202ENST00000357896 MTA1Q13330 715 aa16.24■□□□□ 0.19
IFT20-202ENST00000357896 SPIDRQ14159 915 aa16.24■□□□□ 0.19
IFT20-202ENST00000357896 FOXD4L6Q3SYB3 417 aaPredicted RBP16.24■□□□□ 0.19
IFT20-202ENST00000357896 TMEM259Q4ZIN3 620 aa16.24■□□□□ 0.19
IFT20-202ENST00000357896 DCAF17Q5H9S7 520 aaPredicted RBP16.24■□□□□ 0.19
IFT20-202ENST00000357896 SEL1L3Q68CR1 1132 aa16.24■□□□□ 0.19
IFT20-202ENST00000357896 FOXD4L3Q6VB84 417 aaPredicted RBP16.24■□□□□ 0.19
IFT20-202ENST00000357896 ERN2Q76MJ5 926 aaKnown RBP16.24■□□□□ 0.19
IFT20-202ENST00000357896 CIR1Q86X95 450 aaPredicted RBP16.24■□□□□ 0.19
IFT20-202ENST00000357896 BTN2A2Q8WVV5 523 aa16.24■□□□□ 0.19
IFT20-202ENST00000357896 EXTL1Q92935 676 aa16.24■□□□□ 0.19
IFT20-202ENST00000357896 LIN37Q96GY3 246 aaPredicted RBP16.24■□□□□ 0.19
IFT20-202ENST00000357896 PPP1R16AQ96I34 528 aa16.24■□□□□ 0.19
IFT20-202ENST00000357896 CAAP1Q9H8G2 361 aa16.24■□□□□ 0.19
IFT20-202ENST00000357896 ST7Q9NRC1 585 aa16.24■□□□□ 0.19
IFT20-202ENST00000357896 ZFR2Q9UPR6 939 aaKnown RBP16.24■□□□□ 0.19
IFT20-202ENST00000357896 HS3ST2Q9Y278 367 aa16.24■□□□□ 0.19
IFT20-202ENST00000357896 PCDHB4Q9Y5E5 795 aa16.24■□□□□ 0.19
IFT20-202ENST00000357896 FLNCQ14315 2725 aa16.23■□□□□ 0.19
IFT20-202ENST00000357896 PMS2P1A4D2B8 440 aa16.23■□□□□ 0.19
IFT20-202ENST00000357896 PLD2O14939 933 aa16.23■□□□□ 0.19
IFT20-202ENST00000357896 CTSLP07711 333 aa16.23■□□□□ 0.19
IFT20-202ENST00000357896 JUNDP17535 347 aa16.23■□□□□ 0.19
IFT20-202ENST00000357896 RPL34P49207 117 aaKnown RBP16.23■□□□□ 0.19
IFT20-202ENST00000357896 YWHAZP63104 245 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms