RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 POC5Q8NA72 575 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 TDRD5Q8NAT2 981 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 HJURPQ8NCD3 748 aaPredicted RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 RAB40AQ8WXH6 277 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 LPPQ93052 612 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 BORCS6Q96GS4 357 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SIGLEC10Q96LC7 697 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 C1orf74Q96LT6 269 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 MOGAT1Q96PD6 335 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 AGAP2Q99490 1192 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 MAK16Q9BXY0 300 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 KAT14Q9H8E8 782 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 GLOD4Q9HC38 313 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ERVK-5Q9HDB9 667 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 WSB2Q9NYS7 404 aaPredicted RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SUCLA2Q9P2R7 463 aaPredicted RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 STEAP1Q9UHE8 339 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 FRMD4BQ9Y2L6 1034 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 MROH2AA6NES4 1674 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 CEP170Q5SW79 1584 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 MBD3L5A6NJ08 208 aaPredicted RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 GRXCR1A8MXD5 290 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 MYO1GB0I1T2 1018 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 PMPCBO75439 489 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 GOSR1O95249 250 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 CBX6O95503 412 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 CHRM2P08172 466 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 NR4A1P22736 598 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 DNASE1P24855 282 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 BMPR1AP36894 532 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 KCNJ1P48048 391 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 CLK1P49759 484 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SLURP1P55000 103 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 GPC5P78333 572 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 OLR1P78380 273 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 RRP1BQ14684 758 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 E2F5Q15329 346 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 FAM187BQ17R55 369 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF674Q2M3X9 581 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 CXorf66Q5JRM2 361 aaPredicted RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 RAB41Q5JT25 222 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 OGFOD2Q6N063 350 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SLC30A9Q6PML9 568 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 TSSK4Q6SA08 328 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 MICALCLQ6ZW33 695 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 EXD3Q8N9H8 876 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 FAM110DQ8TAY7 271 aaPredicted RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 PSPC1Q8WXF1 523 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 KLC2Q9H0B6 622 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 XYLT2Q9H1B5 865 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 GOLPH3LQ9H4A5 285 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SLC22A11Q9NSA0 550 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ARL15Q9NXU5 204 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 TAB2Q9NYJ8 693 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 LYVE1Q9Y5Y7 322 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 RGPD1P0DJD0 1748 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 A4D1N5 150 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 MROH6A6NGR9 719 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 H0YAE9 185 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF213O14771 459 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 PLRG1O43660 514 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 CYP7B1O75881 506 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 CAMTA2O94983 1202 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 NKX2-2O95096 273 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 GGPS1O95749 300 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 AFPP02771 609 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 CYP3A4P08684 503 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 HMOX1P09601 288 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 TMIGD3P0DMS9 266 aaPredicted RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 CREB1P16220 341 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 ENGP17813 658 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 MFAP4P55083 255 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 CAP1Q01518 475 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 EPS8Q12929 822 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 PRPF4BQ13523 1007 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 IGSF11Q5DX21 431 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 RNASE12Q5GAN4 147 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 UBXN11Q5T124 520 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 CDC73Q6P1J9 531 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 DRICH1Q6PGQ1 229 aaPredicted RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 PIWIL3Q7Z3Z3 882 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 LIMS2Q7Z4I7 341 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 TFAP2DQ7Z6R9 452 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 CLNKQ7Z7G1 428 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 GLRX5Q86SX6 157 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 TMEM217Q8N7C4 229 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SCAIQ8N9R8 606 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 TOR1AIP2Q8NFQ8 470 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SOCS4Q8WXH5 440 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 VMP1Q96GC9 406 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 HS6ST2Q96MM7 605 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 SMARCAD1Q9H4L7 1026 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 XAB2Q9HCS7 855 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 PLK2Q9NYY3 685 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 MRPL15Q9P015 296 aaKnown RBP1.74□□□□□ -2.13
BRCA1-202ENST00000354071 QRICH2Q9H0J4 1663 aa1.74□□□□□ -2.13
BRCA1-202ENST00000354071 TCOF1Q13428 1488 aaKnown RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 MARF1Q9Y4F3 1742 aaKnown RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 KIF14Q15058 1648 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 hCG_1809904A0A1W2PP81 198 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms