RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 MRPL9Q9BYD2 267 aaKnown RBP20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 PPP1R12CQ9BZL4 782 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 HIPK3Q9H422 1215 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 NOL6Q9H6R4 1146 aaKnown RBP20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 RBM22Q9NW64 420 aaKnown RBP eCLIP20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 COMMD8Q9NX08 183 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 DONSONQ9NYP3 566 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 EMCNQ9ULC0 261 aa20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 MAGED2Q9UNF1 606 aaPredicted RBP20.73■□□□□ 0.91
CHRNA3-202ENST00000348639 H7C4K7 107 aa20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 GSRP00390 522 aa20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 RHOQP17081 205 aa20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 NDST2P52849 883 aa20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 OCRLQ01968 901 aa20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 RTP2Q5QGT7 225 aa20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 N4BP2L1Q5TBK1 243 aaPredicted RBP20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 RSPO2Q6UXX9 243 aaPredicted RBP20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 DEFB128Q7Z7B8 93 aa20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 PARP9Q8IXQ6 854 aa20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 BTN2A3PQ96KV6 586 aa20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 ZYG11BQ9C0D3 744 aa20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 RNF208Q9H0X6 261 aa20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 PAK6Q9NQU5 681 aaPredicted RBP20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 C20orf96Q9NUD7 363 aaPredicted RBP20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 IPO11Q9UI26 975 aaKnown RBP20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 ZFP69BQ9UJL9 534 aa20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 SCN5AQ14524 2016 aa20.72■□□□□ 0.91
CHRNA3-202ENST00000348639 SNNO75324 88 aaPredicted RBP20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 VNN2O95498 520 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 HLA-DQB2P05538 268 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 GALTP07902 379 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 NMBRP28336 390 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 TAF10Q12962 218 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 PCID2Q5JVF3 399 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 CES4AQ5XG92 561 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 RNF19BQ6ZMZ0 732 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 MTDHQ86UE4 582 aaKnown RBP20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 CCDC117Q8IWD4 279 aaPredicted RBP20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 DCLK2Q8N568 766 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 FATE1Q969F0 183 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 TMEM120AQ9BXJ8 343 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 OXCT2Q9BYC2 517 aaPredicted RBP20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 CRISPLD1Q9H336 500 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 TMEM248Q9NWD8 314 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 IGLV3-10A0A075B6K4 115 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 PLIN3O60664 434 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 UPP2O95045 317 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 TBX18O95935 607 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 HAPLN1P10915 354 aaPredicted RBP20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 ADRA1AP35348 466 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 SERPINB8P50452 374 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 CSE1LP55060 971 aaKnown RBP20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 PSMD5Q16401 504 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 TAF1BQ53T94 588 aaPredicted RBP20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 RASIP1Q5U651 963 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 DENND5AQ6IQ26 1287 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 FSTL4Q6MZW2 842 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 C16orf46Q6P387 395 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 ANKS3Q6ZW76 656 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 TAS1R1Q7RTX1 841 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 IPMKQ8NFU5 416 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 C2orf15Q8WU43 125 aaKnown RBP20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 MCMBPQ9BTE3 642 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 ENTPD7Q9NQZ7 604 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 SNX15Q9NRS6 342 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 MARCH2Q9P0N8 246 aa20.71■□□□□ 0.91
CHRNA3-202ENST00000348639 CCDC195A0A1B0GUA6 201 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 MPP3Q13368 585 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 PPM1JQ5JR12 505 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 C10orf120Q5SQS8 335 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 PDPK2PQ6A1A2 396 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 PKN3Q6P5Z2 889 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 CCDC91Q7Z6B0 441 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 CLNKQ7Z7G1 428 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 KIF2BQ8N4N8 673 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 FICDQ9BVA6 458 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 HEY2Q9UBP5 337 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 TRIM33Q9UPN9 1127 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 NYNRINQ9P2P1 1898 aaKnown RBP20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 DNAJC6O75061 913 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 NEBLO76041 1014 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 IGLV3-27P01718 113 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 T-ENOLP0DO92 83 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 STX3Q13277 289 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 HNRNPDQ14103 355 aaKnown RBP20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 FASTKD1Q53R41 847 aaKnown RBP20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 ACBD5Q5T8D3 534 aaPredicted RBP20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 PRSS55Q6UWB4 352 aaPredicted RBP20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 TFAP2DQ7Z6R9 452 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 MIB1Q86YT6 1006 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 ZNF778Q96MU6 729 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 TTPALQ9BTX7 342 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 SAR1AQ9NR31 198 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 NSMCE4AQ9NXX6 385 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 SAGE1Q9NXZ1 904 aa20.7■□□□□ 0.9
CHRNA3-202ENST00000348639 TIMM44O43615 452 aa20.69■□□□□ 0.9
CHRNA3-202ENST00000348639 PEX11BO96011 259 aa20.69■□□□□ 0.9
CHRNA3-202ENST00000348639 PROCP04070 461 aa20.69■□□□□ 0.9
CHRNA3-202ENST00000348639 TARSP26639 723 aaKnown RBP20.69■□□□□ 0.9
CHRNA3-202ENST00000348639 RPL10AP62906 217 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms